Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL133481.2-203ENST00000607558 139 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL021918.2-201ENST00000613415 194 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 AL162574.1-201ENST00000615702 950 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 CXADRP3-202ENST00000617265 1100 ntBASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC4Q9Y296 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AF287957.1-201ENST00000607368 1595 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC107977.1-201ENST00000355745 939 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 RN7SKP275-201ENST00000364626 301 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 RPL11P3-201ENST00000395256 523 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 NPM1P38-201ENST00000403835 865 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC096775.1-201ENST00000437724 448 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 CST12P-201ENST00000457644 362 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 RNU1-88P-201ENST00000459274 128 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 RPL12P24-201ENST00000474907 486 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC079080.1-201ENST00000479841 822 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC025458.1-201ENST00000506046 166 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 MIR2117-201ENST00000516780 80 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AP000648.1-201ENST00000529682 397 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 PCNAP4-201ENST00000532690 730 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AL031601.1-201ENST00000605702 394 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AC025262.3-201ENST00000623666 360 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 AL121839.2-201ENST00000565058 6943 ntBASIC5.3□□□□□ -1.56
TRAPPC4Q9Y296 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 RNU6-673P-201ENST00000365084 104 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 DPPA2P2-201ENST00000418220 897 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 EIF5AP4-201ENST00000441206 465 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC023141.8-201ENST00000442554 208 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AL359839.1-201ENST00000451975 1160 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 LSM3P2-201ENST00000551246 273 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC091078.2-201ENST00000557145 559 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AL356801.1-201ENST00000559320 294 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms