Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 MIR323A-201ENST00000362199 86 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 SNORA51.1-201ENST00000363243 140 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AC113412.1-201ENST00000425840 504 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AL390879.1-201ENST00000439143 386 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AP000547.1-201ENST00000454360 617 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 OSTCP1-201ENST00000455507 450 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AL122020.1-201ENST00000472287 459 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 OR7E157P-201ENST00000494376 911 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 MIR4505-201ENST00000582238 73 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 OR7A1P-201ENST00000601206 970 ntBASIC5.46□□□□□ -1.54
CCDC88CQ9P219 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 RN7SKP162-201ENST00000363605 345 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 RSU1P1-201ENST00000453416 441 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC109481.1-201ENST00000509173 282 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 TMEM97P2-201ENST00000517841 403 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AL161912.4-201ENST00000623889 2468 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 GTF2IP4-201ENST00000453092 2054 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 OR5W1P-201ENST00000423705 938 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC015983.1-201ENST00000441577 373 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CYCSP51-201ENST00000443545 318 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 LRRC37A14P-201ENST00000452297 462 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SIAH1P1-201ENST00000479411 923 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC138866.2-201ENST00000508650 584 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC006115.2-201ENST00000596823 202 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 AL359513.1-201ENST00000614364 557 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 MFSD8-239ENST00000641590 2479 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC88CQ9P219 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.45□□□□□ -1.54
CCDC88CQ9P219 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms