Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VTA1Q9NP79 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
VTA1Q9NP79 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AF287957.1-201ENST00000607368 1595 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AP002370.1-201ENST00000528055 1602 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 FAM32BP-201ENST00000344033 333 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 OR11H13P-201ENST00000359695 979 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AL096711.1-201ENST00000404780 554 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 BTF3P9-201ENST00000418784 283 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 ARL2BPP3-201ENST00000421226 480 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 RPL32P14-201ENST00000463196 378 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC114781.3-201ENST00000512083 142 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 SOX5P1-201ENST00000524155 1127 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 OR4A17P-201ENST00000526032 904 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 RPA2P3-201ENST00000533268 770 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 OR8X1P-201ENST00000534542 869 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC092865.1-201ENST00000544395 1023 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 NOP56P3-201ENST00000549457 385 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 DPPA3P2-202ENST00000557188 1219 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC084759.1-201ENST00000561168 290 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 MTCO3P22-201ENST00000603219 784 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC013244.3-201ENST00000605614 388 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AL645933.2-201ENST00000606743 1207 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AP001033.2-201ENST00000609701 1003 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC012254.5-201ENST00000623573 478 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC068787.1-201ENST00000623908 691 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC073342.3-201ENST00000624211 193 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC097520.1-201ENST00000624435 385 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AC127070.3-201ENST00000503695 3263 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 SNX18P3-202ENST00000565670 1750 ntBASIC6.95□□□□□ -1.3
VTA1Q9NP79 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VTA1Q9NP79 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
VTA1Q9NP79 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 TMSB4XP2-201ENST00000335179 210 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 MIR1203-201ENST00000408812 85 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 RNA5SP178-201ENST00000410380 128 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 BX284632.2-201ENST00000421091 399 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AL035660.1-201ENST00000422041 222 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 RPL12P12-201ENST00000424633 501 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC245884.2-201ENST00000426257 404 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC114973.1-201ENST00000429057 632 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 Z80107.1-201ENST00000436830 412 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 NDUFS5P5-201ENST00000437256 321 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AL512605.1-202ENST00000441919 381 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AL359955.2-201ENST00000445380 353 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC092967.1-201ENST00000449016 481 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 RN7SL273P-201ENST00000481561 299 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC138409.2-202ENST00000507274 458 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms