Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 RNA5SP500-201ENST00000364486 119 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC016739.1-201ENST00000405359 345 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AL391361.1-201ENST00000405580 489 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 RPL34P3-201ENST00000421454 338 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 BRWD1P3-201ENST00000428816 390 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 NPM1P48-201ENST00000436002 853 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 CYCSP51-201ENST00000443545 318 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AL445687.2-201ENST00000458156 728 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC027026.1-201ENST00000532323 742 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 NPM1P5-201ENST00000557228 838 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC015849.6-201ENST00000605454 474 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AL731532.1-201ENST00000623972 4236 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 AC140134.1-201ENST00000511830 3544 ntBASIC5.94□□□□□ -1.46
TM9SF3Q9HD45 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC005261.6-201ENST00000623072 1387 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC027279.1-201ENST00000568885 4284 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 OR10R3P-201ENST00000361688 942 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 RPS27AP3-201ENST00000453803 454 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC010547.7-201ENST00000570323 333 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC013244.1-201ENST00000604279 193 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AL589674.2-201ENST00000604304 337 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 AC097063.1-201ENST00000426714 1797 ntBASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TM9SF3Q9HD45 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TM9SF3Q9HD45 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
TM9SF3Q9HD45 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TM9SF3Q9HD45 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
TM9SF3Q9HD45 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TM9SF3Q9HD45 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms