Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 RN7SL350P-201ENST00000492591 299 ntBASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AL031429.2-201ENST00000602605 649 ntBASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC009283.1-201ENST00000615852 645 ntBASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC073869.10-201ENST00000642016 354 ntBASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC100778.3-201ENST00000580060 1750 ntBASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 AC012254.3-201ENST00000591183 2117 ntBASIC5.77□□□□□ -1.49
VIPAS39Q9H9C1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 FANCD2P2-201ENST00000437591 1400 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC007842.1-201ENST00000597336 2039 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 PCNPP4-201ENST00000414817 517 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 GPN3P1-201ENST00000423883 535 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC007679.3-201ENST00000434035 414 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 BMS1P10-201ENST00000443754 1120 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL590004.3-202ENST00000445883 451 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL596266.1-201ENST00000448132 400 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 RN7SL372P-201ENST00000461982 298 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 RPL5P16-201ENST00000471467 790 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 MTCO1P55-201ENST00000489829 745 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC114940.1-201ENST00000512162 1265 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 CR383658.1-201ENST00000514609 734 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC096661.1-201ENST00000515870 822 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 IGKV1D-32-201ENST00000517449 318 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC135983.3-201ENST00000528049 1226 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 OR4C49P-201ENST00000563891 900 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL353807.4-201ENST00000604995 257 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 OR11H2-202ENST00000641517 1085 ntBASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.76□□□□□ -1.49
VIPAS39Q9H9C1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 RBPJP7-201ENST00000442803 1447 ntBASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 RBPJP5-201ENST00000449433 1447 ntBASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 SELENOWP1-201ENST00000322792 252 ntBASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VIPAS39Q9H9C1 AL132875.1-201ENST00000403623 949 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms