Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 NPM1P19-201ENST00000450070 712 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC090058.1-201ENST00000498788 435 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 RN7SKP157-201ENST00000516174 282 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 TMEM97P2-201ENST00000517841 403 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC110056.1-201ENST00000525759 911 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 OR4A40P-201ENST00000533878 948 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC006530.1-201ENST00000555980 571 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AL356801.1-201ENST00000559320 294 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 FAM27E4-201ENST00000605259 342 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC017076.1-201ENST00000607613 578 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC016542.1-201ENST00000608259 493 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC093388.1-201ENST00000609166 430 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC022467.1-201ENST00000614738 749 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC253576.2-201ENST00000618815 580 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC116667.2-201ENST00000641075 823 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 SDHDP6-201ENST00000414693 480 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 MTND1P26-201ENST00000440488 538 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC023245.1-201ENST00000468501 517 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AL355032.1-201ENST00000472981 438 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 RPS4XP14-201ENST00000493072 781 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 SNORA70.20-201ENST00000516848 126 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 MTND1P6-201ENST00000523621 946 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 NPM1P45-201ENST00000583151 559 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC010615.3-201ENST00000597319 394 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AL451064.1-201ENST00000607718 471 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 MIR6826-201ENST00000617808 98 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC025470.1-201ENST00000510053 2032 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
EBF3Q9H4W6 AC232271.1-201ENST00000602455 2715 ntBASIC6.19□□□□□ -1.42
EBF3Q9H4W6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 PARP4P2-201ENST00000446672 3326 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 SELENOWP1-201ENST00000322792 252 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 OR10R3P-201ENST00000361688 942 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 MIR375-201ENST00000362103 64 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 RN7SKP77-201ENST00000363261 353 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 RN7SKP128-201ENST00000364270 303 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 OR6K3-202ENST00000368146 996 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 HMGB1P32-201ENST00000425971 565 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AC126120.1-201ENST00000431082 470 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 GXYLT1P1-201ENST00000446657 490 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AP000547.1-201ENST00000454360 617 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 RPS27AP2-201ENST00000457576 465 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 RN7SL57P-201ENST00000493687 290 ntBASIC6.18□□□□□ -1.42
EBF3Q9H4W6 AL136038.1-201ENST00000497246 351 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms