Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 ATP5BP1-201ENST00000411980 1574 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 ANKRD36P1-201ENST00000344424 659 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RNU4-68P-201ENST00000364314 141 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 AL033519.1-201ENST00000407266 307 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RNU4-22P-201ENST00000411058 166 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 SLC20A1P1-201ENST00000413906 956 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 MTCO3P4-201ENST00000419236 787 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 PTPN2P1-201ENST00000423212 1072 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK1Q99986 Z68868.1-201ENST00000429048 544 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC084290.1-201ENST00000434995 374 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 LSM3P3-201ENST00000436601 306 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK1Q99986 AL354714.5-201ENST00000450131 590 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 KF459542.1-201ENST00000450908 553 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK1Q99986 AL034369.1-201ENST00000453808 477 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 AL157777.1-201ENST00000468100 304 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC004263.1-201ENST00000479327 332 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK1Q99986 RPL5P33-201ENST00000487833 905 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RN7SL37P-201ENST00000490461 307 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 SNRPCP11-201ENST00000492453 205 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 MINOS1P4-201ENST00000515470 318 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.9□□□□□ -1.46
VRK1Q99986 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.9□□□□□ -1.46
VRK1Q99986 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK1Q99986 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK1Q99986 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RBM22P12-201ENST00000567098 1255 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC145350.1-201ENST00000567426 208 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC023824.3-201ENST00000569003 562 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 ACTG1P15-201ENST00000570019 1063 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RBM22P1-201ENST00000578589 1214 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 AC005377.1-201ENST00000605126 456 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK1Q99986 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
VRK1Q99986 FRG1HP-204ENST00000617940 757 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC096708.4-201ENST00000620563 552 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
VRK1Q99986 AC004777.1-201ENST00000624317 287 ntBASIC5.9□□□□□ -1.46
VRK1Q99986 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.9□□□□□ -1.46
VRK1Q99986 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VRK1Q99986 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.9□□□□□ -1.47
VRK1Q99986 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VRK1Q99986 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
VRK1Q99986 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.9□□□□□ -1.47
VRK1Q99986 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK1Q99986 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VRK1Q99986 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK1Q99986 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VRK1Q99986 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 RN7SKP130-201ENST00000364924 301 ntBASIC5.89□□□□□ -1.47
VRK1Q99986 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VRK1Q99986 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.89□□□□□ -1.47
VRK1Q99986 MIR142-201ENST00000384835 87 ntBASIC5.89□□□□□ -1.47
VRK1Q99986 MIR191-201ENST00000384873 92 ntBASIC5.89□□□□□ -1.47
VRK1Q99986 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.89□□□□□ -1.47
VRK1Q99986 DNAJC19P6-201ENST00000401853 280 ntBASIC5.89□□□□□ -1.47
VRK1Q99986 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.89□□□□□ -1.47
VRK1Q99986 RNA5SP155-201ENST00000411154 129 ntBASIC5.89□□□□□ -1.47
VRK1Q99986 AC096537.2-201ENST00000413707 714 ntBASIC5.89□□□□□ -1.47
VRK1Q99986 HMGB1P49-201ENST00000418882 569 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms