Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC010487.1-201ENST00000594408 1172 ntBASIC6.07□□□□□ -1.44
CCDC42Q96M95 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC002069.2-201ENST00000603580 883 ntBASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC124916.2-201ENST00000604416 224 ntBASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC108673.3-201ENST00000609183 335 ntBASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC42Q96M95 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC42Q96M95 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC42Q96M95 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC42Q96M95 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC083899.1-201ENST00000454465 3819 ntBASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC093225.1-201ENST00000506867 1408 ntBASIC6.07□□□□□ -1.44
CCDC42Q96M95 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC42Q96M95 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC42Q96M95 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC42Q96M95 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC006206.1-201ENST00000544842 3387 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AF287957.1-201ENST00000607368 1595 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC010266.2-201ENST00000564741 3255 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC126120.1-201ENST00000431082 470 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 ATP5LP2-201ENST00000440646 311 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC073465.2-201ENST00000440938 498 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 KF459542.1-201ENST00000450908 553 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC073610.1-201ENST00000489971 396 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 SCARNA18.1-201ENST00000516330 83 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 SEPT10P1-201ENST00000517342 1162 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 IGKV3D-25-201ENST00000519599 235 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC079064.1-201ENST00000528365 362 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AL356801.1-201ENST00000559320 294 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AC010632.3-201ENST00000611377 369 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 MIR6793-201ENST00000612376 63 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC42Q96M95 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC42Q96M95 CASC19-238ENST00000641523 1558 ntBASIC6.06□□□□□ -1.44
CCDC42Q96M95 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 PWAR1-201ENST00000624188 2414 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC144833.1-201ENST00000567953 4089 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 RN7SKP250-201ENST00000363924 321 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AL034417.1-201ENST00000399343 800 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 RIMKLBP2-201ENST00000424737 654 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AL136231.1-201ENST00000429407 730 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 PNKDP1-201ENST00000435914 430 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 VN1R110P-201ENST00000438988 971 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 IGBP1P3-201ENST00000447449 1000 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC009963.3-201ENST00000458090 486 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC021678.3-201ENST00000517893 476 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms