Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 HMGB1P51-201ENST00000605166 638 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC027449.1-201ENST00000608890 407 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC024255.1-201ENST00000614376 102 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AL683826.1-201ENST00000624104 627 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 AL356118.1-201ENST00000635272 1078 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AL355488.2-201ENST00000609909 2850 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 CASC19-238ENST00000641523 1558 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AP000473.2-201ENST00000602659 1537 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC007068.1-201ENST00000396690 844 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 RPL12P23-201ENST00000405880 490 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 AL139805.1-201ENST00000407837 289 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 HMGA1P8-201ENST00000414130 321 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 Z99127.2-201ENST00000441426 334 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 MTATP6P14-201ENST00000455189 673 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 RPL23AP64-201ENST00000469465 435 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 RN7SL170P-201ENST00000487098 295 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC093664.1-201ENST00000511779 289 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 OR4V1P-201ENST00000525394 1140 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC023245.2-201ENST00000530760 2978 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 TOMM20P1-201ENST00000534518 427 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC006116.7-201ENST00000590141 756 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AL589765.6-201ENST00000601909 549 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 SMIM12P1-201ENST00000603004 274 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 CR589904.2-201ENST00000612533 440 ntBASIC6.09□□□□□ -1.43
VPS50Q96JG6 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS50Q96JG6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS50Q96JG6 AC011503.2-201ENST00000594230 1500 ntBASIC6.09□□□□□ -1.44
VPS50Q96JG6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
VPS50Q96JG6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VPS50Q96JG6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC020656.2-201ENST00000613291 5309 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 RN7SKP171-201ENST00000364417 303 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms