Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 SNORA70-201ENST00000384436 135 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RMRPP5-201ENST00000411156 267 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 SUMO2P3-201ENST00000438311 288 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RPL10P14-201ENST00000565265 298 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC027088.4-201ENST00000611559 1947 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RPL23AP27-201ENST00000415161 451 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LDHBP2-201ENST00000456969 1005 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC119403.2-201ENST00000590960 598 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 OR7A1P-202ENST00000641542 1158 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AL117378.2-201ENST00000622916 1337 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC063976.2-201ENST00000425667 3556 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 MIR1286-201ENST00000408112 78 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 UBE2V1P14-201ENST00000415815 558 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AL645937.3-201ENST00000453647 936 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AL035090.1-201ENST00000454835 332 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC083795.1-201ENST00000491760 320 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RN7SL57P-201ENST00000493687 290 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 NENFP3-201ENST00000503735 313 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC067852.5-201ENST00000589299 310 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC079414.3-201ENST00000612986 1090 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RPS2P45-201ENST00000469997 2057 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 BIN2P1-201ENST00000504996 1530 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 PSMD10P3-201ENST00000437000 448 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 TRIM60P16-201ENST00000444048 694 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RN7SL808P-201ENST00000496066 299 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RN7SL708P-201ENST00000580952 299 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 ELOCP28-201ENST00000590044 317 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RN7SL544P-201ENST00000617232 284 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RN7SL763P-201ENST00000620922 284 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 SPATA31D2P-201ENST00000429999 4388 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC004014.2-201ENST00000623718 5122 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 FTO-215ENST00000636491 1676 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AL645733.1-201ENST00000402250 217 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RNU4-64P-201ENST00000410795 131 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC112187.1-201ENST00000455837 479 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 RPS29P22-201ENST00000472363 168 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 MIR2117-201ENST00000516780 80 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AP001885.1-201ENST00000621658 558 ntBASIC1.77□□□□□ -2.13
SYNE1Q8NF91 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNE1Q8NF91 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms