Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VRK3Q8IV63 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
VRK3Q8IV63 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
VRK3Q8IV63 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VRK3Q8IV63 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.09□□□□□ -1.44
VRK3Q8IV63 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
VRK3Q8IV63 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VRK3Q8IV63 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
VRK3Q8IV63 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.09□□□□□ -1.44
VRK3Q8IV63 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 MTND4P10-201ENST00000446199 1363 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 RNU4-28P-201ENST00000364739 141 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AL139805.1-201ENST00000407837 289 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC116036.1-201ENST00000412199 367 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 MTATP6P20-201ENST00000414147 562 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC009518.2-201ENST00000418056 731 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC099782.1-201ENST00000425889 474 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CLNS1AP1-201ENST00000435954 682 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 MRPS21P3-201ENST00000436696 262 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 OR13K1P-201ENST00000444577 975 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 MTND2P28-201ENST00000457540 1044 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 MARK2P8-201ENST00000476069 952 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 OR7E22P-201ENST00000478335 1035 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 RPL12P30-201ENST00000488389 499 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 EIF4E2P2-201ENST00000492033 736 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC111000.6-201ENST00000514471 709 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 RNU6-311P-201ENST00000516224 102 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 NATP-201ENST00000523491 878 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC130364.2-201ENST00000528639 604 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC010620.1-201ENST00000601088 1102 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC113368.1-201ENST00000603736 382 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AL080312.2-201ENST00000613001 630 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 MIR6721-201ENST00000617181 87 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 LINC02211-204ENST00000642024 1070 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC024587.1-201ENST00000505925 2157 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.08□□□□□ -1.44
VRK3Q8IV63 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 AC009779.8-201ENST00000641684 4384 ntBASIC6.08□□□□□ -1.44
VRK3Q8IV63 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VRK3Q8IV63 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VRK3Q8IV63 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 AC097634.1-201ENST00000604491 2467 ntBASIC6.07□□□□□ -1.44
VRK3Q8IV63 AC096656.1-201ENST00000623826 1364 ntBASIC6.07□□□□□ -1.44
VRK3Q8IV63 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VRK3Q8IV63 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VRK3Q8IV63 MARK2P4-201ENST00000503381 2380 ntBASIC6.07□□□□□ -1.44
VRK3Q8IV63 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VRK3Q8IV63 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 ZNF602P-201ENST00000405929 924 ntBASIC6.07□□□□□ -1.44
VRK3Q8IV63 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.07□□□□□ -1.44
VRK3Q8IV63 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.07□□□□□ -1.44
VRK3Q8IV63 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms