Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MTCO1P28-201ENST00000574177 1528 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 RNA5SP77-201ENST00000365394 120 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AL132875.1-201ENST00000403623 949 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 WDR82P2-201ENST00000444540 928 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC004129.2-201ENST00000457229 287 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 NPM1P29-201ENST00000483112 803 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ENPP7P11-201ENST00000505915 627 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC105384.2-201ENST00000508433 640 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC021146.10-201ENST00000515628 706 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 MIR6133-201ENST00000617057 108 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 AL122023.1-201ENST00000622847 530 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 SAMMSON-227ENST00000642114 1199 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ADAM5-202ENST00000399789 1942 ntBASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 LINC01613-201ENST00000561476 2780 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 SNORA70.6-201ENST00000383934 134 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 SNRPEP6-201ENST00000407465 277 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 RNF10P1-201ENST00000418589 369 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC019205.1-201ENST00000421830 730 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC023141.8-201ENST00000442554 208 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AL031681.1-201ENST00000443304 400 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC092865.4-201ENST00000477936 615 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC020779.1-201ENST00000478757 796 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 SNX18P25-201ENST00000510539 758 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 SETP21-201ENST00000514799 892 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 OR4A17P-201ENST00000526032 904 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AP004607.5-201ENST00000532034 217 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 GARSP1-201ENST00000570895 719 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 Z93930.3-201ENST00000607919 749 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 MIR6070-201ENST00000613967 103 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AL139099.4-201ENST00000614802 114 ntBASIC5.12□□□□□ -1.59
CCDC58Q4VC31 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC58Q4VC31 AC007938.2-201ENST00000604666 2634 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC092681.1-201ENST00000297369 291 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 RNU1-134P-201ENST00000362935 165 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms