Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AKAP17BP-201ENST00000431706 2719 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 AC130360.2-201ENST00000533477 1556 ntBASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC144BQ3MJ40 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC005332.9-201ENST00000620266 2921 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 UGT2B26P-201ENST00000508672 1613 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 RNU5B-4P-201ENST00000363508 111 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AP003170.5-201ENST00000397185 335 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 RPL21P50-201ENST00000417698 477 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 RPSAP65-201ENST00000429660 595 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 RPS7P2-201ENST00000435134 607 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 H3F3BP1-201ENST00000440551 403 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AL355355.1-201ENST00000442900 793 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC021205.1-201ENST00000468797 348 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC108103.1-201ENST00000511286 446 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 RNA5SP418-201ENST00000515951 117 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 MTND2P32-201ENST00000521584 1038 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 NPIPB14P-203ENST00000532298 987 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AL049830.4-201ENST00000555149 351 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC097467.4-201ENST00000605504 141 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC012557.1-201ENST00000607115 611 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 CASC19-246ENST00000641625 1606 ntBASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC144BQ3MJ40 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC005225.5-201ENST00000623547 2225 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RN7SKP275-201ENST00000364626 301 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RNU6-729P-201ENST00000384399 107 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RPL5P20-201ENST00000403848 896 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RNA5SP251-201ENST00000410614 137 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RPS3AP25-201ENST00000411660 793 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 Z68694.1-201ENST00000413929 841 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AL139415.1-201ENST00000424862 352 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 NAP1L4P2-201ENST00000425958 899 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC097721.1-201ENST00000427150 1253 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RPL23AP4-201ENST00000427757 463 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 FO393414.1-201ENST00000428697 1184 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC245452.2-201ENST00000435222 392 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AMYP1-201ENST00000440059 1023 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 DNAJA1P5-201ENST00000440278 943 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC092685.1-201ENST00000447960 1243 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RPL21P18-201ENST00000469899 480 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC073610.1-201ENST00000489971 396 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RNA5SP116-201ENST00000516132 98 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 SNORA31.13-201ENST00000516624 135 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC013701.1-201ENST00000522657 465 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 IGLV3-6-201ENST00000523937 250 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC008055.1-201ENST00000547032 609 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RN7SL208P-201ENST00000577964 296 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 RN7SL404P-201ENST00000582421 281 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AL365181.4-201ENST00000609800 547 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC004836.1-201ENST00000623032 634 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms