Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMEM97P2-201ENST00000517841 403 ntBASIC4.3□□□□□ -1.72
CMC4P56277 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.3□□□□□ -1.72
CMC4P56277 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.3□□□□□ -1.72
CMC4P56277 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.3□□□□□ -1.72
CMC4P56277 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.3□□□□□ -1.72
CMC4P56277 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
CMC4P56277 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CMC4P56277 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.3□□□□□ -1.72
CMC4P56277 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.3□□□□□ -1.72
CMC4P56277 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.3□□□□□ -1.72
CMC4P56277 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.3□□□□□ -1.72
CMC4P56277 AC007683.2-201ENST00000624681 714 ntBASIC4.3□□□□□ -1.72
CMC4P56277 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.3□□□□□ -1.72
CMC4P56277 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.3□□□□□ -1.72
CMC4P56277 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.3□□□□□ -1.72
CMC4P56277 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CMC4P56277 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CMC4P56277 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
CMC4P56277 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CMC4P56277 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.3□□□□□ -1.72
CMC4P56277 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CMC4P56277 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CMC4P56277 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CMC4P56277 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CMC4P56277 AC092681.1-201ENST00000297369 291 ntBASIC4.29□□□□□ -1.72
CMC4P56277 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CMC4P56277 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.29□□□□□ -1.72
CMC4P56277 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.29□□□□□ -1.72
CMC4P56277 RNU4-64P-201ENST00000410795 131 ntBASIC4.29□□□□□ -1.72
CMC4P56277 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.29□□□□□ -1.72
CMC4P56277 NIFKP3-201ENST00000417799 865 ntBASIC4.29□□□□□ -1.72
CMC4P56277 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.29□□□□□ -1.72
CMC4P56277 TMEM183AP1-205ENST00000432739 290 ntBASIC4.29□□□□□ -1.72
CMC4P56277 FRG2FP-204ENST00000453982 852 ntBASIC4.29□□□□□ -1.72
CMC4P56277 NXT1P1-201ENST00000458481 316 ntBASIC4.29□□□□□ -1.72
CMC4P56277 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.29□□□□□ -1.72
CMC4P56277 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 AC005363.1-201ENST00000530779 351 ntBASIC4.29□□□□□ -1.72
CMC4P56277 HMGB1P42-201ENST00000532126 553 ntBASIC4.29□□□□□ -1.72
CMC4P56277 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CMC4P56277 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.29□□□□□ -1.72
CMC4P56277 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.29□□□□□ -1.72
CMC4P56277 AC060780.2-201ENST00000589047 198 ntBASIC4.29□□□□□ -1.72
CMC4P56277 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 HIRAP1-201ENST00000605318 787 ntBASIC4.29□□□□□ -1.72
CMC4P56277 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.29□□□□□ -1.72
CMC4P56277 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.29□□□□□ -1.72
CMC4P56277 AC087565.3-203ENST00000641018 837 ntBASIC4.29□□□□□ -1.72
CMC4P56277 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 AC022164.1-201ENST00000568767 2673 ntBASIC4.29□□□□□ -1.72
CMC4P56277 OR13C1P-202ENST00000641378 2919 ntBASIC4.29□□□□□ -1.72
CMC4P56277 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.29□□□□□ -1.72
CMC4P56277 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CMC4P56277 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CMC4P56277 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.29□□□□□ -1.72
CMC4P56277 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CMC4P56277 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CMC4P56277 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CMC4P56277 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CMC4P56277 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CMC4P56277 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.28□□□□□ -1.72
CMC4P56277 HCFC2P1-201ENST00000392864 1592 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.28□□□□□ -1.72
CMC4P56277 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CMC4P56277 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 RNU1-150P-201ENST00000362491 162 ntBASIC4.28□□□□□ -1.72
CMC4P56277 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 MIR551A-201ENST00000385042 96 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AL050305.1-201ENST00000399993 1230 ntBASIC4.28□□□□□ -1.72
CMC4P56277 NACAP7-201ENST00000407371 609 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms