Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.94□□□□□ -1.14
MSH6P52701 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.93□□□□□ -1.14
MSH6P52701 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.93□□□□□ -1.14
MSH6P52701 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.93□□□□□ -1.14
MSH6P52701 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.93□□□□□ -1.14
MSH6P52701 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.93□□□□□ -1.14
MSH6P52701 U3.36-201ENST00000408418 213 ntBASIC7.93□□□□□ -1.14
MSH6P52701 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.93□□□□□ -1.14
MSH6P52701 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.93□□□□□ -1.14
MSH6P52701 RPS29P33-201ENST00000456717 146 ntBASIC7.93□□□□□ -1.14
MSH6P52701 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.93□□□□□ -1.14
MSH6P52701 RPS3AP41-201ENST00000462701 778 ntBASIC7.93□□□□□ -1.14
MSH6P52701 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
MSH6P52701 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.93□□□□□ -1.14
MSH6P52701 AC074255.1-201ENST00000511259 501 ntBASIC7.93□□□□□ -1.14
MSH6P52701 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.93□□□□□ -1.14
MSH6P52701 BRD9P1-201ENST00000529855 560 ntBASIC7.93□□□□□ -1.14
MSH6P52701 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.93□□□□□ -1.14
MSH6P52701 MIR4301-201ENST00000577203 66 ntBASIC7.93□□□□□ -1.14
MSH6P52701 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.93□□□□□ -1.14
MSH6P52701 AC091193.1-201ENST00000604640 448 ntBASIC7.93□□□□□ -1.14
MSH6P52701 AC002090.1-201ENST00000625000 2138 ntBASIC7.93□□□□□ -1.14
MSH6P52701 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
MSH6P52701 AC092724.1-201ENST00000624623 3397 ntBASIC7.93□□□□□ -1.14
MSH6P52701 AC012618.3-205ENST00000637896 1496 ntBASIC7.93□□□□□ -1.14
MSH6P52701 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
MSH6P52701 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH6P52701 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
MSH6P52701 AC011493.1-201ENST00000596753 1632 ntBASIC7.92□□□□□ -1.14
MSH6P52701 ZNF658B-201ENST00000602828 3408 ntBASIC7.92□□□□□ -1.14
MSH6P52701 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 AC119674.1-213ENST00000641177 1386 ntBASIC7.92□□□□□ -1.14
MSH6P52701 AC093162.1-201ENST00000419682 124 ntBASIC7.92□□□□□ -1.14
MSH6P52701 RBMY2QP-201ENST00000429799 1147 ntBASIC7.92□□□□□ -1.14
MSH6P52701 AC015983.1-201ENST00000441577 373 ntBASIC7.92□□□□□ -1.14
MSH6P52701 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.92□□□□□ -1.14
MSH6P52701 AC105233.1-201ENST00000498840 781 ntBASIC7.92□□□□□ -1.14
MSH6P52701 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.92□□□□□ -1.14
MSH6P52701 RN7SKP99-201ENST00000517028 307 ntBASIC7.92□□□□□ -1.14
MSH6P52701 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.92□□□□□ -1.14
MSH6P52701 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.92□□□□□ -1.14
MSH6P52701 BLZF2P-201ENST00000553776 1130 ntBASIC7.92□□□□□ -1.14
MSH6P52701 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.92□□□□□ -1.14
MSH6P52701 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.92□□□□□ -1.14
MSH6P52701 AC024589.2-201ENST00000605642 1294 ntBASIC7.92□□□□□ -1.14
MSH6P52701 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.92□□□□□ -1.14
MSH6P52701 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.92□□□□□ -1.14
MSH6P52701 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH6P52701 LINC01616-201ENST00000561816 2280 ntBASIC7.91□□□□□ -1.14
MSH6P52701 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
MSH6P52701 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
MSH6P52701 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
MSH6P52701 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
MSH6P52701 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.91□□□□□ -1.14
MSH6P52701 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 SNORA67-201ENST00000384423 137 ntBASIC7.91□□□□□ -1.14
MSH6P52701 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.91□□□□□ -1.14
MSH6P52701 NIFKP3-201ENST00000417799 865 ntBASIC7.91□□□□□ -1.14
MSH6P52701 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.91□□□□□ -1.14
MSH6P52701 RPL38P3-201ENST00000484463 213 ntBASIC7.91□□□□□ -1.14
MSH6P52701 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.91□□□□□ -1.14
MSH6P52701 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 PCNPP1-201ENST00000552501 511 ntBASIC7.91□□□□□ -1.14
MSH6P52701 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.91□□□□□ -1.14
MSH6P52701 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH6P52701 OR4H6P-201ENST00000563771 921 ntBASIC7.91□□□□□ -1.14
MSH6P52701 MIR3934-201ENST00000579806 107 ntBASIC7.91□□□□□ -1.14
MSH6P52701 AL596275.2-208ENST00000641192 594 ntBASIC7.91□□□□□ -1.14
MSH6P52701 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH6P52701 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH6P52701 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH6P52701 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH6P52701 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.9□□□□□ -1.14
MSH6P52701 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.9□□□□□ -1.14
MSH6P52701 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH6P52701 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
MSH6P52701 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms