Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 GAPDHP59-201ENST00000435908 267 ntBASIC7.22□□□□□ -1.25
MRE11P49959 AL590399.4-201ENST00000436561 601 ntBASIC7.22□□□□□ -1.25
MRE11P49959 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.22□□□□□ -1.25
MRE11P49959 MTND2P30-201ENST00000456663 382 ntBASIC7.22□□□□□ -1.25
MRE11P49959 GAPDHP53-201ENST00000458397 924 ntBASIC7.22□□□□□ -1.25
MRE11P49959 RN7SL216P-201ENST00000471607 298 ntBASIC7.22□□□□□ -1.25
MRE11P49959 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.22□□□□□ -1.25
MRE11P49959 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.22□□□□□ -1.25
MRE11P49959 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.22□□□□□ -1.25
MRE11P49959 AC117525.1-201ENST00000515228 503 ntBASIC7.22□□□□□ -1.25
MRE11P49959 AC093878.1-201ENST00000515630 432 ntBASIC7.22□□□□□ -1.25
MRE11P49959 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.22□□□□□ -1.25
MRE11P49959 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.22□□□□□ -1.25
MRE11P49959 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 AC068339.2-201ENST00000534395 618 ntBASIC7.22□□□□□ -1.25
MRE11P49959 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.22□□□□□ -1.25
MRE11P49959 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.22□□□□□ -1.25
MRE11P49959 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 AC093524.1-201ENST00000564266 1094 ntBASIC7.22□□□□□ -1.25
MRE11P49959 AC234775.3-201ENST00000564612 656 ntBASIC7.22□□□□□ -1.25
MRE11P49959 RN7SL339P-201ENST00000580597 296 ntBASIC7.22□□□□□ -1.25
MRE11P49959 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
MRE11P49959 AC004158.1-201ENST00000564508 4319 ntBASIC7.22□□□□□ -1.25
MRE11P49959 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MRE11P49959 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.22□□□□□ -1.25
MRE11P49959 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.25
MRE11P49959 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MRE11P49959 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MRE11P49959 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 DNM1P47-203ENST00000571780 12667 ntBASIC7.21□□□□□ -1.26
MRE11P49959 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
MRE11P49959 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
MRE11P49959 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
MRE11P49959 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 RNA5SP474-201ENST00000391234 90 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AL031985.1-201ENST00000392713 418 ntBASIC7.21□□□□□ -1.26
MRE11P49959 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
MRE11P49959 AC000089.1-201ENST00000424559 801 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC114973.1-201ENST00000429057 632 ntBASIC7.21□□□□□ -1.26
MRE11P49959 OR6R1P-201ENST00000431838 940 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AK3P5-201ENST00000432033 519 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 ELOCP3-201ENST00000439303 348 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.21□□□□□ -1.26
MRE11P49959 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.21□□□□□ -1.26
MRE11P49959 TDGP1-201ENST00000543961 1229 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC037479.1-201ENST00000558361 625 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 AC025283.1-201ENST00000572039 734 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.21□□□□□ -1.26
MRE11P49959 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 AC067773.1-201ENST00000603284 1094 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AL590032.1-201ENST00000604920 252 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC009974.1-201ENST00000608881 455 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.21□□□□□ -1.26
MRE11P49959 AL356118.1-201ENST00000635272 1078 ntBASIC7.21□□□□□ -1.26
MRE11P49959 AC003992.1-201ENST00000635364 557 ntBASIC7.21□□□□□ -1.26
MRE11P49959 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 AC023245.2-201ENST00000530760 2978 ntBASIC7.21□□□□□ -1.26
MRE11P49959 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
MRE11P49959 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
MRE11P49959 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MRE11P49959 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
MRE11P49959 ZNF806-201ENST00000438300 1774 ntBASIC7.2□□□□□ -1.26
MRE11P49959 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 CASC19-261ENST00000641853 1638 ntBASIC7.2□□□□□ -1.26
MRE11P49959 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 AC120036.2-201ENST00000509729 1474 ntBASIC7.2□□□□□ -1.26
MRE11P49959 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.2□□□□□ -1.26
MRE11P49959 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
MRE11P49959 SNORA63.3-201ENST00000362682 132 ntBASIC7.2□□□□□ -1.26
MRE11P49959 PSMA6P1-201ENST00000400275 741 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AL158827.1-201ENST00000416300 391 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms