Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.4□□□□□ -1.54
RFC3P40938 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
RFC3P40938 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFC3P40938 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFC3P40938 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFC3P40938 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFC3P40938 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
RFC3P40938 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.4□□□□□ -1.55
RFC3P40938 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFC3P40938 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RFC3P40938 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFC3P40938 AC092692.1-201ENST00000623625 2595 ntBASIC5.4□□□□□ -1.55
RFC3P40938 PDZK1P1-202ENST00000425209 1350 ntBASIC5.4□□□□□ -1.55
RFC3P40938 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.4□□□□□ -1.55
RFC3P40938 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.39□□□□□ -1.55
RFC3P40938 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RFC3P40938 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RFC3P40938 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.39□□□□□ -1.55
RFC3P40938 RN7SKP286-201ENST00000410894 299 ntBASIC5.39□□□□□ -1.55
RFC3P40938 RN7SKP17-201ENST00000411242 351 ntBASIC5.39□□□□□ -1.55
RFC3P40938 MRPL53P1-201ENST00000414323 319 ntBASIC5.39□□□□□ -1.55
RFC3P40938 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 AL513325.1-201ENST00000417716 1034 ntBASIC5.39□□□□□ -1.55
RFC3P40938 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.39□□□□□ -1.55
RFC3P40938 AC007562.1-201ENST00000421819 517 ntBASIC5.39□□□□□ -1.55
RFC3P40938 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 AL445928.1-201ENST00000435545 222 ntBASIC5.39□□□□□ -1.55
RFC3P40938 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 AC023274.2-201ENST00000445264 521 ntBASIC5.39□□□□□ -1.55
RFC3P40938 RPL23AP60-201ENST00000450011 454 ntBASIC5.39□□□□□ -1.55
RFC3P40938 ACA64.4-201ENST00000459070 127 ntBASIC5.39□□□□□ -1.55
RFC3P40938 RN7SL717P-201ENST00000478343 297 ntBASIC5.39□□□□□ -1.55
RFC3P40938 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 RN7SL273P-201ENST00000481561 299 ntBASIC5.39□□□□□ -1.55
RFC3P40938 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.39□□□□□ -1.55
RFC3P40938 CCDC11P1-201ENST00000503137 1162 ntBASIC5.39□□□□□ -1.55
RFC3P40938 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.39□□□□□ -1.55
RFC3P40938 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 OR4A40P-201ENST00000533878 948 ntBASIC5.39□□□□□ -1.55
RFC3P40938 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.39□□□□□ -1.55
RFC3P40938 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
RFC3P40938 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
RFC3P40938 GARSP1-201ENST00000570895 719 ntBASIC5.39□□□□□ -1.55
RFC3P40938 AC023389.2-201ENST00000580031 955 ntBASIC5.39□□□□□ -1.55
RFC3P40938 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 MIR132-201ENST00000591554 101 ntBASIC5.39□□□□□ -1.55
RFC3P40938 MIR6886-201ENST00000619864 61 ntBASIC5.39□□□□□ -1.55
RFC3P40938 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RFC3P40938 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 OR4G1P-202ENST00000641173 1788 ntBASIC5.39□□□□□ -1.55
RFC3P40938 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFC3P40938 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RFC3P40938 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RFC3P40938 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFC3P40938 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.38□□□□□ -1.55
RFC3P40938 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
RFC3P40938 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.38□□□□□ -1.55
RFC3P40938 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFC3P40938 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFC3P40938 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFC3P40938 PTCD2P2-201ENST00000415579 1095 ntBASIC5.38□□□□□ -1.55
RFC3P40938 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.38□□□□□ -1.55
RFC3P40938 SDC4P-201ENST00000453285 601 ntBASIC5.38□□□□□ -1.55
RFC3P40938 RPSAP37-201ENST00000470913 821 ntBASIC5.38□□□□□ -1.55
RFC3P40938 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.38□□□□□ -1.55
RFC3P40938 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.38□□□□□ -1.55
RFC3P40938 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.38□□□□□ -1.55
RFC3P40938 AC109481.1-201ENST00000509173 282 ntBASIC5.38□□□□□ -1.55
RFC3P40938 AC021733.2-201ENST00000518830 497 ntBASIC5.38□□□□□ -1.55
RFC3P40938 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.38□□□□□ -1.55
RFC3P40938 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.38□□□□□ -1.55
RFC3P40938 AC119403.2-201ENST00000590960 598 ntBASIC5.38□□□□□ -1.55
RFC3P40938 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.38□□□□□ -1.55
RFC3P40938 AC027334.1-201ENST00000603257 310 ntBASIC5.38□□□□□ -1.55
RFC3P40938 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.38□□□□□ -1.55
RFC3P40938 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.38□□□□□ -1.55
RFC3P40938 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.38□□□□□ -1.55
RFC3P40938 MIR193BHG-214ENST00000641765 509 ntBASIC5.38□□□□□ -1.55
RFC3P40938 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
RFC3P40938 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
RFC3P40938 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.38□□□□□ -1.55
RFC3P40938 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFC3P40938 AL137058.3-201ENST00000624531 3099 ntBASIC5.38□□□□□ -1.55
RFC3P40938 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.38□□□□□ -1.55
RFC3P40938 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms