Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CHRNA3P32297 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CHRNA3P32297 RNA5SP91-201ENST00000390902 119 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 AC009506.2-201ENST00000420635 840 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AC013268.2-201ENST00000420753 337 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 RNGTTP1-201ENST00000420965 728 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 RPS3P2-201ENST00000421346 701 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA3P32297 GAPDHP75-201ENST00000433910 943 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 RPS12P17-201ENST00000438591 377 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 VN1R110P-201ENST00000438988 971 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 AC016724.1-201ENST00000453215 421 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA3P32297 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA3P32297 UGT2A3P7-201ENST00000510485 734 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 NPM1P21-201ENST00000513394 762 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 SETP21-201ENST00000514799 892 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.1□□□□□ -1.43
CHRNA3P32297 WBP1LP3-201ENST00000523033 208 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA3P32297 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA3P32297 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 HIRAP1-201ENST00000605318 787 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 NANOGP3-201ENST00000605855 286 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA3P32297 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CHRNA3P32297 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 AL034546.1-201ENST00000623740 3693 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CHRNA3P32297 AC116158.1-201ENST00000560231 2129 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 AC012254.3-201ENST00000591183 2117 ntBASIC6.1□□□□□ -1.43
CHRNA3P32297 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CHRNA3P32297 MFSD8-239ENST00000641590 2479 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA3P32297 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA3P32297 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.09□□□□□ -1.43
CHRNA3P32297 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 FBXL21-201ENST00000297158 1305 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA3P32297 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 TMSB4XP2-201ENST00000335179 210 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 RN7SKP185-201ENST00000362813 326 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CHRNA3P32297 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 SNRPEP6-201ENST00000407465 277 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 RPL35AP3-201ENST00000414680 288 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 SETP9-201ENST00000423837 832 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 VN1R21P-201ENST00000426703 765 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 RPS29P14-201ENST00000431518 171 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 NDUFS5P5-201ENST00000437256 321 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 TUBB4BP6-201ENST00000437576 479 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.09□□□□□ -1.43
CHRNA3P32297 RPS23P9-201ENST00000448848 438 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 RNU1-88P-201ENST00000459274 128 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 RN7SL197P-201ENST00000466981 299 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 RN7SL269P-201ENST00000467795 305 ntBASIC6.09□□□□□ -1.43
CHRNA3P32297 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.09□□□□□ -1.43
CHRNA3P32297 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.09□□□□□ -1.43
CHRNA3P32297 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.09□□□□□ -1.43
CHRNA3P32297 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA3P32297 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA3P32297 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA3P32297 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA3P32297 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.09□□□□□ -1.44
CHRNA3P32297 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.09□□□□□ -1.44
CHRNA3P32297 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.09□□□□□ -1.44
CHRNA3P32297 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.44
CHRNA3P32297 BCORP1-203ENST00000513194 5093 ntBASIC6.08□□□□□ -1.44
CHRNA3P32297 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA3P32297 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA3P32297 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHRNA3P32297 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHRNA3P32297 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA3P32297 CASC19-255ENST00000641733 1385 ntBASIC6.08□□□□□ -1.44
CHRNA3P32297 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA3P32297 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA3P32297 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.08□□□□□ -1.44
CHRNA3P32297 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CHRNA3P32297 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms