Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC026688.1-201ENST00000520639 1168 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 RPL10P14-201ENST00000565265 298 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC087283.1-201ENST00000604029 1074 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 AC105148.1-201ENST00000604961 409 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 AP005131.7-201ENST00000610087 611 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 HPVC1-201ENST00000629899 1198 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 CASC19-281ENST00000642118 1554 ntBASIC8.6□□□□□ -1.03
RAPGEF3O95398 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.6□□□□□ -1.03
RAPGEF3O95398 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RAPGEF3O95398 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 AOX3P-204ENST00000491025 2107 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 RN7SKP104-201ENST00000362605 328 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 RNVU1-6-201ENST00000364688 164 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 OR6D1P-201ENST00000436165 939 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC090114.3-201ENST00000479267 829 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 RPL5P22-201ENST00000480199 884 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 IGHV1-14-201ENST00000523391 241 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC106730.2-201ENST00000566641 540 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 ADAD1P2-201ENST00000588476 646 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 AC009831.5-201ENST00000624000 3189 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.59□□□□□ -1.03
RAPGEF3O95398 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 PANDAR-201ENST00000629595 1506 ntBASIC8.59□□□□□ -1.03
RAPGEF3O95398 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RAPGEF3O95398 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
RAPGEF3O95398 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
RAPGEF3O95398 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
RAPGEF3O95398 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
RAPGEF3O95398 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 AC011369.2-201ENST00000624423 1567 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 SNORA51.8-201ENST00000384234 132 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RAPGEF3O95398 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 AL022237.1-201ENST00000446663 358 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 OR13C1P-201ENST00000457612 963 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 AP000919.1-201ENST00000582850 985 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 AC008745.1-201ENST00000604064 271 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 KATNBL1P1-201ENST00000605192 748 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 AL158211.2-201ENST00000607282 395 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 AP000346.3-201ENST00000622821 210 ntBASIC8.58□□□□□ -1.04
RAPGEF3O95398 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RAPGEF3O95398 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RAPGEF3O95398 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
RAPGEF3O95398 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
RAPGEF3O95398 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
RAPGEF3O95398 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RAPGEF3O95398 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RAPGEF3O95398 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
RAPGEF3O95398 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.57□□□□□ -1.04
RAPGEF3O95398 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
RAPGEF3O95398 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms