Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GRPEL2P2-201ENST00000421856 670 ntBASIC5.57□□□□□ -1.52
SNX3O60493 ELOBP4-201ENST00000423418 296 ntBASIC5.57□□□□□ -1.52
SNX3O60493 CLCN3P1-201ENST00000423965 1017 ntBASIC5.57□□□□□ -1.52
SNX3O60493 PSMD10P2-201ENST00000432890 672 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC019185.3-201ENST00000438805 323 ntBASIC5.57□□□□□ -1.52
SNX3O60493 NANOGP9-201ENST00000439890 892 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC234771.2-201ENST00000445718 597 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC002553.3-201ENST00000453002 341 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AZGP1P2-201ENST00000454506 345 ntBASIC5.57□□□□□ -1.52
SNX3O60493 NXT1P1-201ENST00000458481 316 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC245028.2-201ENST00000458673 253 ntBASIC5.57□□□□□ -1.52
SNX3O60493 RN7SL39P-201ENST00000462264 297 ntBASIC5.57□□□□□ -1.52
SNX3O60493 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX3O60493 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX3O60493 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.57□□□□□ -1.52
SNX3O60493 CR383658.1-201ENST00000514609 734 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX3O60493 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX3O60493 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX3O60493 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX3O60493 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 AC091078.2-201ENST00000557145 559 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX3O60493 AC117490.2-201ENST00000610042 594 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AC016911.1-201ENST00000613297 452 ntBASIC5.57□□□□□ -1.52
SNX3O60493 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 AL132656.3-201ENST00000606384 1595 ntBASIC5.57□□□□□ -1.52
SNX3O60493 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX3O60493 AC100757.1-201ENST00000616872 1835 ntBASIC5.57□□□□□ -1.52
SNX3O60493 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX3O60493 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX3O60493 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 TRIM51GP-201ENST00000534741 1350 ntBASIC5.56□□□□□ -1.52
SNX3O60493 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 AC114947.2-201ENST00000565748 2125 ntBASIC5.56□□□□□ -1.52
SNX3O60493 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX3O60493 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX3O60493 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SNX3O60493 SELENOWP1-201ENST00000322792 252 ntBASIC5.56□□□□□ -1.52
SNX3O60493 RNU6-891P-201ENST00000384280 111 ntBASIC5.56□□□□□ -1.52
SNX3O60493 SNORA48.4-201ENST00000391089 134 ntBASIC5.56□□□□□ -1.52
SNX3O60493 PPIAP9-201ENST00000403866 498 ntBASIC5.56□□□□□ -1.52
SNX3O60493 RPL35AP3-201ENST00000414680 288 ntBASIC5.56□□□□□ -1.52
SNX3O60493 RPL12P43-201ENST00000420608 499 ntBASIC5.56□□□□□ -1.52
SNX3O60493 KIF4CP-201ENST00000422742 1279 ntBASIC5.56□□□□□ -1.52
SNX3O60493 RIMKLBP2-201ENST00000424737 654 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 GAPDHP48-201ENST00000436626 961 ntBASIC5.56□□□□□ -1.52
SNX3O60493 XKRYP6-201ENST00000440468 1116 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC234771.4-201ENST00000441416 730 ntBASIC5.56□□□□□ -1.52
SNX3O60493 XKRYP3-201ENST00000442113 1116 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC016772.1-201ENST00000444170 1261 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX3O60493 HMGN1P8-201ENST00000463578 288 ntBASIC5.56□□□□□ -1.52
SNX3O60493 RPS23P2-201ENST00000463671 415 ntBASIC5.56□□□□□ -1.52
SNX3O60493 RN7SL83P-201ENST00000468131 297 ntBASIC5.56□□□□□ -1.52
SNX3O60493 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX3O60493 RNU6-362P-201ENST00000516736 90 ntBASIC5.56□□□□□ -1.52
SNX3O60493 OR8A2P-201ENST00000528631 952 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AP002004.1-206ENST00000532441 876 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC036111.2-201ENST00000533247 901 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC078878.1-201ENST00000539832 958 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC068993.1-201ENST00000546724 589 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 AL049874.4-201ENST00000557593 255 ntBASIC5.56□□□□□ -1.52
SNX3O60493 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 AGGF1P7-201ENST00000562369 913 ntBASIC5.56□□□□□ -1.52
SNX3O60493 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
SNX3O60493 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX3O60493 FCGR1CP-201ENST00000579737 1127 ntBASIC5.56□□□□□ -1.52
SNX3O60493 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX3O60493 PRPF19P1-201ENST00000584766 898 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AL589765.6-201ENST00000601909 549 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.56□□□□□ -1.52
SNX3O60493 AL139099.4-201ENST00000614802 114 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC018558.4-201ENST00000622153 281 ntBASIC5.56□□□□□ -1.52
SNX3O60493 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX3O60493 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 AL731532.2-201ENST00000623542 1953 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC015689.2-201ENST00000528172 1738 ntBASIC5.56□□□□□ -1.52
SNX3O60493 AC004023.1-201ENST00000561473 1744 ntBASIC5.56□□□□□ -1.52
SNX3O60493 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms