Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CUX2O14529 AC012512.1-201ENST00000446594 718 ntBASIC9.75□□□□□ -0.85
CUX2O14529 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC9.75□□□□□ -0.85
CUX2O14529 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
CUX2O14529 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC9.75□□□□□ -0.85
CUX2O14529 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.75□□□□□ -0.85
CUX2O14529 OR4H6P-201ENST00000563771 921 ntBASIC9.75□□□□□ -0.85
CUX2O14529 AC069307.1-201ENST00000602820 447 ntBASIC9.75□□□□□ -0.85
CUX2O14529 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.75□□□□□ -0.85
CUX2O14529 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.75□□□□□ -0.85
CUX2O14529 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
CUX2O14529 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
CUX2O14529 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CUX2O14529 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
CUX2O14529 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
CUX2O14529 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.75□□□□□ -0.85
CUX2O14529 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
CUX2O14529 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.75□□□□□ -0.85
CUX2O14529 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CUX2O14529 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
CUX2O14529 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
CUX2O14529 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.74□□□□□ -0.85
CUX2O14529 RPL7P16-201ENST00000479738 738 ntBASIC9.74□□□□□ -0.85
CUX2O14529 RPL37AP8-201ENST00000494116 276 ntBASIC9.74□□□□□ -0.85
CUX2O14529 AC015864.1-201ENST00000496512 544 ntBASIC9.74□□□□□ -0.85
CUX2O14529 AC026402.1-201ENST00000513642 170 ntBASIC9.74□□□□□ -0.85
CUX2O14529 RN7SKP122-201ENST00000515923 296 ntBASIC9.74□□□□□ -0.85
CUX2O14529 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.74□□□□□ -0.85
CUX2O14529 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.74□□□□□ -0.85
CUX2O14529 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC9.74□□□□□ -0.85
CUX2O14529 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
CUX2O14529 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 AL391262.1-201ENST00000556558 1992 ntBASIC9.74□□□□□ -0.85
CUX2O14529 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CUX2O14529 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
CUX2O14529 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CUX2O14529 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.73□□□□□ -0.85
CUX2O14529 DSTNP5-201ENST00000427921 523 ntBASIC9.73□□□□□ -0.85
CUX2O14529 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 AC122718.1-201ENST00000439448 744 ntBASIC9.73□□□□□ -0.85
CUX2O14529 FAM133DP-201ENST00000464802 691 ntBASIC9.73□□□□□ -0.85
CUX2O14529 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.73□□□□□ -0.85
CUX2O14529 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.73□□□□□ -0.85
CUX2O14529 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.73□□□□□ -0.85
CUX2O14529 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.73□□□□□ -0.85
CUX2O14529 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CUX2O14529 ASNSP1-204ENST00000641977 1664 ntBASIC9.73□□□□□ -0.85
CUX2O14529 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 AC005034.3-201ENST00000604845 1747 ntBASIC9.73□□□□□ -0.85
CUX2O14529 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
CUX2O14529 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC9.73□□□□□ -0.85
CUX2O14529 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.73□□□□□ -0.85
CUX2O14529 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CUX2O14529 PABPC1P8-201ENST00000452851 2086 ntBASIC9.73□□□□□ -0.85
CUX2O14529 RN7SKP227-201ENST00000364445 330 ntBASIC9.72□□□□□ -0.85
CUX2O14529 RNU4-2-201ENST00000365668 141 ntBASIC9.72□□□□□ -0.85
CUX2O14529 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CUX2O14529 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC9.72□□□□□ -0.85
CUX2O14529 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.72□□□□□ -0.85
CUX2O14529 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.72□□□□□ -0.85
CUX2O14529 NMNAT1P5-201ENST00000559657 841 ntBASIC9.72□□□□□ -0.85
CUX2O14529 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.72□□□□□ -0.85
CUX2O14529 MIR4737-201ENST00000583979 81 ntBASIC9.72□□□□□ -0.85
CUX2O14529 AC095055.1-201ENST00000603472 1113 ntBASIC9.72□□□□□ -0.85
CUX2O14529 AC010857.1-201ENST00000606398 594 ntBASIC9.72□□□□□ -0.85
CUX2O14529 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.72□□□□□ -0.85
CUX2O14529 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.72□□□□□ -0.85
CUX2O14529 AC091905.4-201ENST00000623432 202 ntBASIC9.72□□□□□ -0.85
CUX2O14529 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CUX2O14529 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.72□□□□□ -0.85
CUX2O14529 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CUX2O14529 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
CUX2O14529 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CUX2O14529 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CUX2O14529 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.72□□□□□ -0.85
CUX2O14529 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CUX2O14529 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
CUX2O14529 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
CUX2O14529 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CUX2O14529 AC006213.6-201ENST00000623722 4179 ntBASIC9.72□□□□□ -0.85
CUX2O14529 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms