Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SAMM50P1-201ENST00000455403 1399 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 PPBPP2-201ENST00000513150 1362 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SLC28A1O00337 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 SNORA51.9-201ENST00000384295 124 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AL359885.1-201ENST00000415786 903 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC28A1O00337 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC28A1O00337 RPL5P2-201ENST00000429598 854 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC28A1O00337 OR7L1P-201ENST00000456181 380 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 RN7SL197P-201ENST00000466981 299 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 RPS7P6-201ENST00000485777 579 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC28A1O00337 RN7SL568P-201ENST00000493069 298 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC28A1O00337 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AC009879.1-201ENST00000520029 839 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC28A1O00337 RPA2P1-201ENST00000556557 721 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AC090236.2-201ENST00000587933 1101 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 AC005479.3-201ENST00000602790 431 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.56□□□□□ -1.52
SLC28A1O00337 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC28A1O00337 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
SLC28A1O00337 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
SLC28A1O00337 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC011933.2-201ENST00000578539 2790 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SLC28A1O00337 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 UGT2B24P-201ENST00000514441 1597 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 RN7SKP185-201ENST00000362813 326 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SLC28A1O00337 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SLC28A1O00337 GCNT1P4-201ENST00000404096 329 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AL096711.1-201ENST00000404780 554 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 RN7SKP86-201ENST00000410454 332 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 CASKP1-201ENST00000412870 582 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 SETP9-201ENST00000423837 832 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 RPS23P9-201ENST00000448848 438 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 CFL1P4-201ENST00000451536 498 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC009963.3-201ENST00000458090 486 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 SNORD125-201ENST00000459538 96 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 RPS23P2-201ENST00000463671 415 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AC098818.1-201ENST00000478593 252 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC28A1O00337 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC074255.1-201ENST00000511259 501 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 CCNHP1-201ENST00000513311 678 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC28A1O00337 WBP1LP3-201ENST00000523033 208 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC28A1O00337 AP003396.4-201ENST00000527574 265 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 AP003033.2-201ENST00000528901 805 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC28A1O00337 BTG1P1-201ENST00000540396 508 ntBASIC5.55□□□□□ -1.52
SLC28A1O00337 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms