Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 AC093424.1-201ENST00000604999 338 ntBASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 AC091768.1-201ENST00000609258 930 ntBASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 AC009464.1-201ENST00000615731 469 ntBASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 AC111152.1-202ENST00000635848 339 ntBASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 AL139384.2-201ENST00000613809 3590 ntBASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA6Q9Y5G7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 CDC27P2-201ENST00000425026 1922 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 ZNF29P-201ENST00000225587 168 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 PPIAP24-201ENST00000328558 471 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RNU5B-1-201ENST00000363286 116 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 SNORD35A-201ENST00000363389 86 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RNA5SP232-201ENST00000364144 119 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 SNORA70.3-201ENST00000365075 132 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 PSMA6P1-201ENST00000400275 741 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RNA5SP498-201ENST00000411342 120 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL663061.1-201ENST00000416625 580 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 NANOGP5-201ENST00000424456 877 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RPL12P11-201ENST00000439970 501 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RPL5P10-201ENST00000445207 894 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RPL6P9-201ENST00000466502 859 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 METTL15P1-201ENST00000481421 1045 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC020699.1-201ENST00000505161 445 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC021220.1-201ENST00000507445 630 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RNU6-311P-201ENST00000516224 102 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC018558.5-201ENST00000565840 952 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC063977.7-201ENST00000594454 337 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL160237.3-201ENST00000604114 1013 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL499605.1-201ENST00000604628 403 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL589743.6-201ENST00000611025 117 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AP000676.4-201ENST00000624659 623 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC007114.2-201ENST00000576014 4281 ntBASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PCDHGA6Q9Y5G7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms