Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 SNORD16-201ENST00000362803 99 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 MTND2P18-201ENST00000419962 1030 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AL139184.1-202ENST00000422303 222 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 RN7SL393P-201ENST00000463588 296 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 RNA5SP418-201ENST00000515951 117 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 ZNF321P-202ENST00000550843 495 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC233702.7-202ENST00000582941 211 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC005034.4-201ENST00000603612 899 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC107952.2-201ENST00000606048 486 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC005899.7-201ENST00000618199 588 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC026585.1-201ENST00000619582 524 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AP000547.3-204ENST00000588548 2523 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 AC009831.5-201ENST00000624000 3189 ntBASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB4Q9Y5E5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC125238.2-201ENST00000430003 1440 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AL359976.1-201ENST00000418655 3528 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 OR5H2-201ENST00000355273 945 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 RNA5SP478-201ENST00000364657 115 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 VIM2P-201ENST00000402383 1294 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 HMGB1P13-201ENST00000406019 642 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 RN7SKP129-201ENST00000410288 299 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AL606490.7-201ENST00000433136 191 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 RBMY2HP-201ENST00000457961 720 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 SNX18P26-201ENST00000458433 740 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 RNU7-157P-201ENST00000459600 66 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC008410.1-201ENST00000483777 339 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC113420.1-201ENST00000507903 571 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 MRPS5P3-201ENST00000515577 166 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 COX6B1P4-201ENST00000519826 484 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC027667.1-201ENST00000545814 304 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 RN7SL475P-201ENST00000583379 298 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AC025588.2-201ENST00000604851 466 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AL008723.3-201ENST00000608926 449 ntBASIC6.84□□□□□ -1.31
PCDHB4Q9Y5E5 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms