Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC016550.3-201ENST00000515706 767 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC005363.1-201ENST00000530779 351 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 MIR3154-201ENST00000577829 84 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC134669.1-201ENST00000581275 672 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC005242.1-201ENST00000585658 438 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC133794.1-201ENST00000602731 914 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AL499605.1-201ENST00000604628 403 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 MIR7109-201ENST00000613748 65 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC245389.2-201ENST00000616023 576 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC242843.1-201ENST00000618702 573 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AC090772.4-201ENST00000623599 362 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AL357140.4-201ENST00000636827 412 ntBASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
DTX4Q9Y2E6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC027279.1-201ENST00000568885 4284 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AL645638.1-201ENST00000440519 361 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC010240.2-201ENST00000445363 1205 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 HMGN1P5-201ENST00000448591 263 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC118758.1-202ENST00000454719 225 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 CTSLP6-201ENST00000458273 1002 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 OR7E99P-201ENST00000505750 922 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC112198.4-201ENST00000515450 351 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC020937.1-201ENST00000519677 1013 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 MIR4760-201ENST00000585040 80 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AP001823.1-201ENST00000604056 1003 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC008555.7-201ENST00000605008 583 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 RFPL4AP6-201ENST00000616792 846 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AL645927.2-201ENST00000618350 349 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 MAPK10-350ENST00000641777 965 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC009779.8-201ENST00000641684 4384 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC011416.1-201ENST00000514947 1732 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC010168.2-201ENST00000562691 5428 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC017002.4-201ENST00000604721 1525 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC119674.1-202ENST00000641333 1860 ntBASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DTX4Q9Y2E6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
DTX4Q9Y2E6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms