Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC018710.1-201ENST00000506509 158 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ATP1B1P1-201ENST00000509767 915 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 NTAN1P2-201ENST00000515730 940 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 IGLVIV-59-201ENST00000520218 250 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ULK4P2-202ENST00000564187 492 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 RN7SL376P-201ENST00000578594 264 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MIR5705-201ENST00000579870 89 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 RN7SL473P-201ENST00000580341 299 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 PRR13P3-201ENST00000603578 376 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC140658.6-201ENST00000603958 201 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL590560.2-201ENST00000608430 732 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL592295.2-201ENST00000612578 206 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC040896.1-201ENST00000613819 479 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC018816.2-201ENST00000621460 353 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL445264.1-201ENST00000621719 171 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 TSHZ2-205ENST00000626626 670 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC020904.2-202ENST00000614660 1401 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 SPATA2P1-201ENST00000431223 2055 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC090181.3-201ENST00000624777 1514 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC010886.1-201ENST00000437380 2869 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RNU4-79P-201ENST00000362764 141 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 Y_RNA.144-201ENST00000363521 113 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RNU6-534P-201ENST00000364877 106 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 SNORA7B-201ENST00000384360 139 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PHBP1-201ENST00000392260 808 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 H2AFZP3-201ENST00000394213 387 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MSRB1P1-201ENST00000396851 354 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RPL5P35-201ENST00000398869 816 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AL356776.1-201ENST00000406574 447 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AL590806.1-201ENST00000415818 853 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MTND3P17-201ENST00000416968 344 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 ELOCP14-201ENST00000428070 331 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 SAR1AP4-201ENST00000429225 591 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 ELOCP7-201ENST00000439968 331 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC015983.1-201ENST00000441577 373 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 MED28P8-201ENST00000454831 521 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 PNPLA4P1-201ENST00000458328 305 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC021205.1-201ENST00000468797 348 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 RN7SL89P-201ENST00000480252 283 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC108120.2-201ENST00000512973 294 ntBASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.57□□□□□ -1.2
CUEDC1Q9NWM3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms