Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 RN7SKP144-201ENST00000411108 279 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC234771.2-201ENST00000445718 597 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 PFN1P6-201ENST00000476786 399 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC021193.1-201ENST00000511607 420 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 CCDC58P1-201ENST00000578567 430 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC022106.1-201ENST00000612834 766 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC024884.1-201ENST00000620583 399 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AL122023.1-201ENST00000622847 530 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC133552.1-201ENST00000569988 4007 ntBASIC5.19□□□□□ -1.58
HMG20AQ9NP66 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMG20AQ9NP66 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AP001642.1-201ENST00000624727 2117 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AL133260.1-201ENST00000405720 405 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 OR3D1P-201ENST00000438288 955 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 ARMC4P1-201ENST00000438905 707 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AL645936.1-201ENST00000441979 518 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 PSAT1P4-201ENST00000466500 526 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 OR7E22P-201ENST00000478335 1035 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC021146.10-201ENST00000515628 706 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 RNU2-45P-201ENST00000516068 187 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC027026.1-201ENST00000532323 742 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 DPRXP4-201ENST00000578053 568 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC012368.3-201ENST00000604190 219 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC011891.2-201ENST00000604949 397 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AC091932.2-201ENST00000623014 291 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 AL731566.1-201ENST00000620490 1937 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 LINC01613-201ENST00000561476 2780 ntBASIC5.18□□□□□ -1.58
HMG20AQ9NP66 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.18□□□□□ -1.58
HMG20AQ9NP66 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.17□□□□□ -1.58
HMG20AQ9NP66 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms