Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC087672.1-201ENST00000479876 766 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 CDC42P3-201ENST00000518493 633 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 OR5AM1P-201ENST00000532136 1032 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 DPPA3P2-202ENST00000557188 1219 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC106730.2-201ENST00000566641 540 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 FO393422.1-201ENST00000603908 708 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC117409.1-201ENST00000470499 1310 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 RARSP1-201ENST00000542842 1418 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC087516.1-201ENST00000561236 2428 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 GAPDHP24-201ENST00000328713 983 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 RPSAP35-201ENST00000413753 818 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 RPS26P41-201ENST00000450370 284 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC007386.1-201ENST00000455212 582 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 RPL5P12-201ENST00000477071 851 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC022215.1-201ENST00000481770 362 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC007225.2-201ENST00000562529 256 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 MIR1269B-201ENST00000580405 75 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AP000864.1-201ENST00000609424 650 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 MIR193BHG-214ENST00000641765 509 ntBASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.1□□□□□ -1.59
KIAA1549Q9HCM3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AL161912.4-201ENST00000623889 2468 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AL034549.2-201ENST00000618285 3373 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 RPL7P58-201ENST00000402913 758 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 BX679664.2-201ENST00000439282 283 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 OSTCP1-201ENST00000455507 450 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AL603882.1-201ENST00000463059 681 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 RN7SL570P-201ENST00000484405 292 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 PDCL3P4-201ENST00000489621 720 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 HMGB1P42-201ENST00000532126 553 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC137627.1-201ENST00000545761 289 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC063977.5-201ENST00000601044 974 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 BX323046.1-201ENST00000610145 535 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC079395.2-201ENST00000610982 737 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC069234.4-201ENST00000621276 412 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 LCOR-201ENST00000286067 4542 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC004014.2-201ENST00000623718 5122 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms