Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC119751.4-201ENST00000507498 357 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC117525.1-201ENST00000515228 503 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 MIR4760-201ENST00000585040 80 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC067773.1-201ENST00000603284 1094 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AL391834.1-201ENST00000609609 560 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AL391834.2-201ENST00000609982 546 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 FAM27E2-201ENST00000619668 403 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC069234.4-201ENST00000621276 412 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC119674.1-220ENST00000641502 1048 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 RNU105B-201ENST00000364478 208 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL121977.1-201ENST00000401636 979 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 RN7SKP108-201ENST00000411367 328 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 NAP1L4P2-201ENST00000425958 899 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL390879.1-201ENST00000439143 386 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 MTND2P25-201ENST00000449028 610 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL162739.1-201ENST00000450606 307 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 RN7SL352P-201ENST00000466002 277 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 CR383656.1-201ENST00000484916 377 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC090958.1-201ENST00000511122 351 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC010374.2-201ENST00000512933 535 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 MTATP6P9-201ENST00000515039 680 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 RNU6-415P-201ENST00000516252 97 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL049779.3-201ENST00000557141 606 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 DPPA3P2-202ENST00000557188 1219 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 MIR4701-201ENST00000583094 63 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC008507.3-201ENST00000585753 472 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC119403.2-201ENST00000590960 598 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AP001823.1-201ENST00000604056 1003 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC017076.1-201ENST00000607613 578 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC034229.4-201ENST00000607861 441 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL590410.1-201ENST00000617925 333 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC129778.1-202ENST00000623812 261 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AL591379.1-207ENST00000635982 261 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC008691.1-209ENST00000642094 814 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 NLRP3P1-201ENST00000622303 1785 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 AC022325.1-201ENST00000502748 2199 ntBASIC6.25□□□□□ -1.41
USP29Q9HBJ7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
USP29Q9HBJ7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms