Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR56A7P-201ENST00000524865 941 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 OR4A46P-201ENST00000527255 933 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 MTND1P8-201ENST00000571424 950 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 MIR3189-201ENST00000578735 73 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC068313.1-201ENST00000604028 1008 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 FAM72A-208ENST00000607379 1139 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL136131.3-201ENST00000607600 188 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC004908.3-201ENST00000610248 625 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RNA5SP440-201ENST00000612665 119 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC107905.1-201ENST00000616204 426 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL353684.1-201ENST00000622677 1120 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC083837.1-201ENST00000565297 2994 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RARSP1-201ENST00000542842 1418 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 CIR1P2-201ENST00000514821 1342 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL049634.1-201ENST00000453770 1720 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
EBF3Q9H4W6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 RPL23AP17-201ENST00000401064 499 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 SUMO2P3-201ENST00000438311 288 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 BMS1P10-201ENST00000443754 1120 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AP000281.1-201ENST00000444036 316 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC110749.1-201ENST00000462007 357 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 RPSAP39-201ENST00000467439 883 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 RPSAP37-201ENST00000470913 821 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 RN7SL177P-201ENST00000476596 299 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC124945.1-201ENST00000485133 188 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC083795.1-201ENST00000491760 320 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 MIR4760-201ENST00000585040 80 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC092474.3-201ENST00000603022 568 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AL049840.6-201ENST00000604583 345 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 RPL12P48-201ENST00000605620 304 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC130360.2-201ENST00000533477 1556 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 AC079753.1-201ENST00000623243 3868 ntBASIC6.21□□□□□ -1.42
EBF3Q9H4W6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
EBF3Q9H4W6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 HDAC1P2-201ENST00000453661 1398 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AL359091.1-201ENST00000449048 1734 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 U3.25-201ENST00000391209 220 ntBASIC6.2□□□□□ -1.42
EBF3Q9H4W6 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.2□□□□□ -1.42
EBF3Q9H4W6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms