Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC023490.2-201ENST00000359859 470 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 SNORA11.3-201ENST00000408471 128 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 RNF10P1-201ENST00000418589 369 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AL512637.1-201ENST00000439523 1231 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AL136455.1-201ENST00000441083 1240 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 RPL32P33-201ENST00000487023 394 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC114781.3-201ENST00000512083 142 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 SCARNA6.1-201ENST00000516989 238 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC027243.2-201ENST00000602530 724 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 SNORA11.6-201ENST00000619030 128 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC079776.5-201ENST00000641920 211 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AL591135.1-201ENST00000401578 5914 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC005261.2-201ENST00000593427 4258 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 AC004076.2-201ENST00000620532 3323 ntBASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 TRAV35-201ENST00000390462 330 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 LYPLA1P3-201ENST00000402650 695 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 NENFP1-201ENST00000419476 466 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 OR10T1P-201ENST00000424327 947 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 RPSAP41-201ENST00000439695 860 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 HLA-DPA3-207ENST00000454398 229 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 NENFP3-201ENST00000503735 313 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AGGF1P7-201ENST00000562369 913 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AC063977.5-201ENST00000601044 974 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 OR8G3P-202ENST00000641572 1255 ntBASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCSER1Q9C0I3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 RPS29P14-201ENST00000431518 171 ntBASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC073072.2-201ENST00000447425 348 ntBASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 SNORD125-201ENST00000459538 96 ntBASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 RN7SL284P-201ENST00000498823 275 ntBASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 KATNBL1P4-201ENST00000503545 918 ntBASIC6.41□□□□□ -1.38
CCSER1Q9C0I3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms