Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL606537.1-201ENST00000607258 2011 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL359263.1-201ENST00000441188 2796 ntBASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.86□□□□□ -1.15
TRAIPQ9BWF2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL355488.2-201ENST00000609909 2850 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC004014.2-201ENST00000623718 5122 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RNA5SP53-201ENST00000391299 120 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC234782.4-201ENST00000417646 1048 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC007559.1-201ENST00000428736 355 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 FTLP17-201ENST00000432567 525 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RPL5P4-201ENST00000434805 886 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RPS10P14-201ENST00000440748 502 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 ZNF736P5Y-201ENST00000451173 805 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC234771.3-201ENST00000454984 622 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RPSAP7-201ENST00000456871 885 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 GAPDHP53-201ENST00000458397 924 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 MTND1P16-201ENST00000465177 898 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RN7SL518P-201ENST00000491887 280 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC010587.2-201ENST00000511727 448 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 DCAF13P2-201ENST00000514188 555 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC096661.1-201ENST00000515870 822 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 CDC42P3-201ENST00000518493 633 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL135978.1-201ENST00000553618 1266 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL109628.1-201ENST00000556877 366 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL392048.1-201ENST00000613946 534 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC122133.1-201ENST00000613964 233 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC026124.2-201ENST00000621847 656 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC079248.2-201ENST00000623779 326 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC073530.2-201ENST00000623987 261 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 MFSD8-217ENST00000641178 4374 ntBASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRAIPQ9BWF2 AL590065.1-201ENST00000603371 4774 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 IL6STP1-201ENST00000346911 1020 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms