Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 LINC02035-201ENST00000610128 5476 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC005614.1-201ENST00000598952 3653 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 Y_RNA.88-201ENST00000363029 99 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 RN7SKP47-201ENST00000365347 328 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 Y_RNA.560-201ENST00000384689 102 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 USP9YP33-201ENST00000412220 421 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 XKRYP4-201ENST00000414395 483 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC097721.1-201ENST00000427150 1253 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 NDUFS5P5-201ENST00000437256 321 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC005297.1-201ENST00000444765 862 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 XKRYP5-201ENST00000449659 483 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 RNU6-956P-201ENST00000458868 103 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC114324.2-202ENST00000503812 134 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC021146.7-201ENST00000509604 775 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC091965.2-201ENST00000512324 613 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC018992.1-201ENST00000523778 2149 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 SERPINE4P-201ENST00000554978 281 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 MIR3157-201ENST00000578688 85 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC095031.1-201ENST00000623685 672 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC138915.4-201ENST00000565549 4147 ntBASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CCDC85AQ96PX6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 RNA5SP85-201ENST00000365378 119 ntBASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 RPL9P21-201ENST00000392269 505 ntBASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 MTCO2P19-201ENST00000427513 598 ntBASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AL592437.1-201ENST00000443781 492 ntBASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.54□□□□□ -1.04
CCDC85AQ96PX6 MEF2AP1-201ENST00000454867 863 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms