Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AL355488.2-201ENST00000609909 2850 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 U3.10-201ENST00000364459 214 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC117434.1-201ENST00000419971 836 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 REREP1Y-201ENST00000422655 198 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 REREP2Y-201ENST00000439103 200 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC004129.2-201ENST00000457229 287 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 MTND6P32-201ENST00000457611 483 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AL157777.1-201ENST00000468100 304 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC099521.1-201ENST00000482557 334 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ASNSP4-201ENST00000511103 447 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AP003396.4-201ENST00000527574 265 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC084121.1-201ENST00000533882 835 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC007956.1-201ENST00000555623 542 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 SNORD39.2-201ENST00000579995 76 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC108673.3-201ENST00000609183 335 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 MIR6793-201ENST00000612376 63 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 AC027088.4-201ENST00000611559 1947 ntBASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM5Q96HC4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AL353625.1-202ENST00000366273 571 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 MIR137-201ENST00000385223 102 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 MIR1275-201ENST00000408770 80 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 SNORA79B-201ENST00000410557 148 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 RNGTTP1-201ENST00000420965 728 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC019205.1-201ENST00000421830 730 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 EIF5AP4-201ENST00000441206 465 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 SEPT7P3-201ENST00000455017 621 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 RPL12P39-201ENST00000455456 496 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC098847.1-201ENST00000473094 348 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 RN7SL284P-201ENST00000498823 275 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC091917.2-201ENST00000505002 744 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC008676.3-201ENST00000521237 435 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC008507.3-201ENST00000585753 472 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 LSM1P2-201ENST00000604911 322 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AC107905.1-201ENST00000616204 426 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 MIR6806-201ENST00000622141 64 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 AP001052.1-201ENST00000626421 99 ntBASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PDLIM5Q96HC4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms