Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 SNORA70.17-201ENST00000516449 133 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC124891.1-201ENST00000536322 519 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC084824.2-201ENST00000548906 345 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC027281.1-201ENST00000574178 758 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC006115.2-201ENST00000596823 202 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC067838.1-201ENST00000606064 577 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 AC008833.1-201ENST00000611633 691 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.25□□□□□ -1.57
RFT1Q96AA3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFT1Q96AA3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFT1Q96AA3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFT1Q96AA3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFT1Q96AA3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFT1Q96AA3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.25□□□□□ -1.57
RFT1Q96AA3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AP001029.2-203ENST00000589795 4910 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 MIR365B-201ENST00000362317 111 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 RNU6-386P-201ENST00000362650 107 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 SNORA64.3-201ENST00000365647 134 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC087752.1-201ENST00000391360 558 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 RNU2-22P-201ENST00000411266 212 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 PTCD2P2-201ENST00000415579 1095 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AL360013.1-201ENST00000419031 858 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 RPEP4-201ENST00000437636 602 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 POU5F1P5-201ENST00000445059 658 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 RPL23AP60-201ENST00000450011 454 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AP003385.3-201ENST00000472498 287 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC022336.1-201ENST00000475510 337 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 RPL5P22-201ENST00000480199 884 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC093816.1-201ENST00000515076 913 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 CYCSP25-201ENST00000525280 316 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 WBP1LP11-201ENST00000586141 328 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC026898.1-201ENST00000586404 571 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC022387.2-201ENST00000604050 448 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC008555.7-201ENST00000605008 583 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 uc_338.26-201ENST00000612659 160 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC015712.7-201ENST00000615211 635 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AL122023.1-201ENST00000622847 530 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC022400.9-201ENST00000623633 273 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 AC217777.1-201ENST00000570034 1471 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 MTND5P23-201ENST00000430812 1655 ntBASIC5.24□□□□□ -1.57
RFT1Q96AA3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFT1Q96AA3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms