Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 IGKV3D-25-201ENST00000519599 235 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC009879.1-201ENST00000520029 839 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 IGLV3-30-201ENST00000524362 298 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC138207.8-204ENST00000579588 527 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC124916.2-201ENST00000604416 224 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC091167.5-201ENST00000605689 894 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AL139099.4-201ENST00000614802 114 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC079776.5-201ENST00000641920 211 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AL162456.1-201ENST00000634535 2006 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 HSPD1P9-201ENST00000420325 1636 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 RN7SKP171-201ENST00000364417 303 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 RPL11P3-201ENST00000395256 523 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 RN7SKP86-201ENST00000410454 332 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AL359885.1-201ENST00000415786 903 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC113412.1-201ENST00000425840 504 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 VTI1BP4-201ENST00000427516 527 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 RPL5P7-201ENST00000444235 813 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 MTND6P5-201ENST00000448266 512 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 Z83838.1-202ENST00000456225 839 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC112184.1-201ENST00000505179 312 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC018797.1-201ENST00000510791 255 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AL163952.1-202ENST00000569625 600 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 HIRAP1-201ENST00000605318 787 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC145423.1-201ENST00000605712 336 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 MIR6809-201ENST00000612189 116 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC015660.5-201ENST00000623238 564 ntBASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.53□□□□□ -1.52
CLHC1Q8NHS4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 NAMPTP1-201ENST00000440465 2514 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AL158152.1-201ENST00000602652 1435 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 DEFA9P-201ENST00000433042 285 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 PNKDP1-201ENST00000435914 430 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC097463.1-201ENST00000447288 481 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC005077.1-201ENST00000449226 375 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 RN7SL72P-201ENST00000460697 269 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC092865.4-201ENST00000477936 615 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC021006.1-201ENST00000489849 553 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms