Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 NPM1P40-201ENST00000412758 733 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 RPS26P4-201ENST00000431743 355 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 GAPDHP19-201ENST00000431768 1005 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 SOCS5P1-201ENST00000440415 949 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AL031681.1-201ENST00000443304 400 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 POU5F1P5-201ENST00000445059 658 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 RPL10P17-201ENST00000453852 316 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC015524.1-201ENST00000491585 472 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 HMGB1P46-201ENST00000520062 610 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 CYCSP25-201ENST00000525280 316 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC135983.3-201ENST00000528049 1226 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 TDGP1-201ENST00000543961 1229 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC007494.1-201ENST00000562293 760 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC015802.5-201ENST00000607478 399 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC138965.3-201ENST00000623875 498 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LSMEM1Q8N8F7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 ADAM24P-201ENST00000398655 2101 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AL121835.1-201ENST00000404250 354 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 RN7SKP121-201ENST00000410842 305 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC009302.1-201ENST00000417147 390 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 RPS7P14-201ENST00000426405 583 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC099063.2-201ENST00000446360 662 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AL513343.1-201ENST00000451818 792 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 RN7SL809P-201ENST00000482040 297 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AL035690.1-201ENST00000490892 383 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 GM2AP2-201ENST00000491764 562 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 OR9N1P-202ENST00000494289 481 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 CDH12P2-201ENST00000504393 298 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 OR4D12P-201ENST00000509361 911 ntBASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LSMEM1Q8N8F7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms