Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 AC007114.2-201ENST00000576014 4281 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 AC068870.1-201ENST00000563737 2455 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 MT-RNR2-201ENST00000387347 1559 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 RN7SKP59-201ENST00000410520 314 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 METTL15P3-201ENST00000415522 1221 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 IGKV2-19-201ENST00000518132 283 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 RBM22P1-201ENST00000578589 1214 ntBASIC8.71□□□□□ -1.02
VPS8Q8N3P4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.71□□□□□ -1.02
VPS8Q8N3P4 AC235565.1-201ENST00000456962 1325 ntBASIC8.7□□□□□ -1.02
VPS8Q8N3P4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 CFL1P1-202ENST00000432948 411 ntBASIC8.7□□□□□ -1.02
VPS8Q8N3P4 AC078878.1-201ENST00000539832 958 ntBASIC8.7□□□□□ -1.02
VPS8Q8N3P4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 NMNAT1P5-201ENST00000559657 841 ntBASIC8.7□□□□□ -1.02
VPS8Q8N3P4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 MIR6826-201ENST00000617808 98 ntBASIC8.7□□□□□ -1.02
VPS8Q8N3P4 AC005840.5-201ENST00000619166 599 ntBASIC8.7□□□□□ -1.02
VPS8Q8N3P4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VPS8Q8N3P4 AC013268.3-201ENST00000262716 2324 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 BMS1P13-201ENST00000417301 885 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 snoU13.29-201ENST00000459370 104 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 BLZF2P-201ENST00000553776 1130 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC018558.5-201ENST00000565840 952 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC010245.2-201ENST00000606908 1167 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC136428.4-201ENST00000634254 1155 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC137056.2-201ENST00000624055 1958 ntBASIC8.69□□□□□ -1.02
VPS8Q8N3P4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS8Q8N3P4 AC130360.2-201ENST00000533477 1556 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 MIR551A-201ENST00000385042 96 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 DBIP1-201ENST00000401435 260 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 Z93019.1-201ENST00000416450 973 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AC073072.2-201ENST00000447425 348 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 AP000769.2-201ENST00000602344 396 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.68□□□□□ -1.02
VPS8Q8N3P4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms