Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 MIR4776-2-201ENST00000580204 80 ntBASIC5.51□□□□□ -1.53
RTL4Q6ZR62 AP001357.1-201ENST00000586304 1053 ntBASIC5.51□□□□□ -1.53
RTL4Q6ZR62 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.51□□□□□ -1.53
RTL4Q6ZR62 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 MAPK10-350ENST00000641777 965 ntBASIC5.51□□□□□ -1.53
RTL4Q6ZR62 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTL4Q6ZR62 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC027088.4-201ENST00000611559 1947 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 MRRFP1-201ENST00000435941 1675 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AP000473.2-201ENST00000602659 1537 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC016739.1-201ENST00000405359 345 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 MYL6P5-201ENST00000412707 459 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 RPL35AP3-201ENST00000414680 288 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AL354766.1-201ENST00000423396 542 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 CDY8P-201ENST00000428380 1279 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 FTLP19-201ENST00000433300 394 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 CDY20P-201ENST00000447528 1279 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC104164.1-201ENST00000460282 590 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 RN7SL269P-201ENST00000467795 305 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 RPL12P24-201ENST00000474907 486 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 TRBV5-2-201ENST00000489095 273 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 UGT2A3P7-201ENST00000510485 734 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 snoU109.5-201ENST00000516231 132 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC136777.2-201ENST00000522979 358 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC092121.1-201ENST00000569452 202 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC025857.2-201ENST00000602711 238 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AL021918.2-201ENST00000613415 194 ntBASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL4Q6ZR62 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 AL359955.1-201ENST00000455242 3275 ntBASIC5.49□□□□□ -1.53
RTL4Q6ZR62 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 RN7SKP128-201ENST00000364270 303 ntBASIC5.49□□□□□ -1.53
RTL4Q6ZR62 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.49□□□□□ -1.53
RTL4Q6ZR62 AL035660.1-201ENST00000422041 222 ntBASIC5.49□□□□□ -1.53
RTL4Q6ZR62 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL4Q6ZR62 VTI1BP4-201ENST00000427516 527 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms