Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC133104.1-201ENST00000429100 218 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 RPS3AP52-201ENST00000435639 297 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC234064.1-201ENST00000436312 247 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 HMGB3P22-202ENST00000451823 572 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 RN7SL74P-201ENST00000464966 299 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 RPL3P10-201ENST00000476002 1164 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 RPL7AP56-201ENST00000476420 791 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 RN7SL864P-201ENST00000493457 285 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 RN7SL445P-201ENST00000495609 293 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AL109766.1-201ENST00000555080 552 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 MTCO3P23-201ENST00000561363 289 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC138915.2-201ENST00000569776 97 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 MIR4666A-201ENST00000580160 79 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC068790.5-201ENST00000602741 355 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC011626.1-201ENST00000604710 562 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AL451054.3-201ENST00000611115 776 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AL359757.2-201ENST00000624309 274 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC012467.2-201ENST00000607783 2583 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 Y_RNA.180-201ENST00000363867 113 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 RNU6-99P-201ENST00000364721 107 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 RNU6-187P-201ENST00000384139 106 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 HMGB1P11-201ENST00000413899 637 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL137014.1-201ENST00000420490 1226 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 RPL23AP34-201ENST00000423483 410 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC139712.2-201ENST00000424302 339 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL590365.1-201ENST00000450788 243 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 RNU6-261P-201ENST00000459506 102 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 RN7SL91P-201ENST00000469313 291 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 MED28P2-201ENST00000475771 317 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC117395.1-201ENST00000487390 403 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 RPS3P7-201ENST00000488662 726 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 CYP4F27P-201ENST00000514557 494 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 IGHVII-26-2-201ENST00000518751 325 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 NPIPP1-203ENST00000547107 1071 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 TVP23CP2-201ENST00000571473 623 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 RN7SL657P-201ENST00000582431 293 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VARS2Q5ST30 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC8.75□□□□□ -1.01
VARS2Q5ST30 AL953862.2-201ENST00000603089 820 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC023513.1-201ENST00000604396 691 ntBASIC8.75□□□□□ -1.01
VARS2Q5ST30 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms