Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP1Q04837 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSBP1Q04837 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSBP1Q04837 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSBP1Q04837 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC007842.1-201ENST00000597336 2039 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 LINC01613-201ENST00000561476 2780 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
SSBP1Q04837 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 RN7SKP74-201ENST00000362849 309 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 RNA5SP77-201ENST00000365394 120 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.73□□□□□ -1.65
SSBP1Q04837 MIR1266-201ENST00000408125 84 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.73□□□□□ -1.65
SSBP1Q04837 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 AL034369.1-201ENST00000453808 477 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 RPL31P11-202ENST00000454082 372 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 AC073610.1-201ENST00000489971 396 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 RPS12P31-201ENST00000491419 398 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
SSBP1Q04837 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.73□□□□□ -1.65
SSBP1Q04837 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.73□□□□□ -1.65
SSBP1Q04837 MIR4258-201ENST00000580920 91 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.73□□□□□ -1.65
SSBP1Q04837 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.73□□□□□ -1.65
SSBP1Q04837 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC108738.1-201ENST00000603703 237 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 CLUHP10-201ENST00000631979 980 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 AC063952.1-203ENST00000634410 658 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSBP1Q04837 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC104964.3-201ENST00000606115 2860 ntBASIC4.73□□□□□ -1.65
SSBP1Q04837 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSBP1Q04837 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.73□□□□□ -1.65
SSBP1Q04837 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SSBP1Q04837 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 MUC2-202ENST00000613187 4845 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 AL731566.1-201ENST00000620490 1937 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SSBP1Q04837 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.72□□□□□ -1.65
SSBP1Q04837 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP1Q04837 Z95331.1-201ENST00000623075 23112 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSBP1Q04837 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
SSBP1Q04837 AC211486.3-201ENST00000412694 621 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 FAM183DP-201ENST00000421987 399 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 REREP1Y-201ENST00000422655 198 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 RPL12P18-201ENST00000437175 325 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 REREP2Y-201ENST00000439103 200 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.72□□□□□ -1.65
SSBP1Q04837 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 RN7SL72P-201ENST00000460697 269 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 RPS7P10-201ENST00000464254 603 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP1Q04837 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 AC022360.1-201ENST00000521058 340 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.72□□□□□ -1.65
SSBP1Q04837 TRIM51DP-201ENST00000529746 596 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP1Q04837 AC068993.1-201ENST00000546724 589 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
SSBP1Q04837 MIR4701-201ENST00000583094 63 ntBASIC4.72□□□□□ -1.65
SSBP1Q04837 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP1Q04837 AL390877.1-201ENST00000605704 214 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms