Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
CBX1P83916 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CBX1P83916 RNA5SP429-201ENST00000363688 109 ntBASIC5.84□□□□□ -1.47
CBX1P83916 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 SMC4P1-201ENST00000414479 527 ntBASIC5.84□□□□□ -1.47
CBX1P83916 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 RPL36AP10-201ENST00000421785 322 ntBASIC5.84□□□□□ -1.47
CBX1P83916 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 OSTCP2-201ENST00000437956 444 ntBASIC5.84□□□□□ -1.47
CBX1P83916 SERPINA7P1-201ENST00000443077 631 ntBASIC5.84□□□□□ -1.47
CBX1P83916 RNU1-88P-201ENST00000459274 128 ntBASIC5.84□□□□□ -1.47
CBX1P83916 PSAT1P4-201ENST00000466500 526 ntBASIC5.84□□□□□ -1.47
CBX1P83916 AC112184.1-201ENST00000505179 312 ntBASIC5.84□□□□□ -1.47
CBX1P83916 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 HMGB3P16-201ENST00000508037 287 ntBASIC5.84□□□□□ -1.47
CBX1P83916 HMGB1P19-201ENST00000517578 577 ntBASIC5.84□□□□□ -1.47
CBX1P83916 IGHV4-55-201ENST00000520889 368 ntBASIC5.84□□□□□ -1.47
CBX1P83916 PSMC1P8-201ENST00000536820 1296 ntBASIC5.84□□□□□ -1.47
CBX1P83916 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.84□□□□□ -1.47
CBX1P83916 AC006349.1-201ENST00000555526 235 ntBASIC5.84□□□□□ -1.47
CBX1P83916 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.84□□□□□ -1.47
CBX1P83916 AP006587.6-201ENST00000582128 1091 ntBASIC5.84□□□□□ -1.47
CBX1P83916 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.84□□□□□ -1.47
CBX1P83916 NANOGP3-201ENST00000605855 286 ntBASIC5.84□□□□□ -1.47
CBX1P83916 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CBX1P83916 AP001273.1-201ENST00000624493 3152 ntBASIC5.84□□□□□ -1.47
CBX1P83916 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CBX1P83916 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.84□□□□□ -1.47
CBX1P83916 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CBX1P83916 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CBX1P83916 SAMMSON-213ENST00000641336 1521 ntBASIC5.84□□□□□ -1.48
CBX1P83916 HSPA8P18-201ENST00000439846 1928 ntBASIC5.84□□□□□ -1.48
CBX1P83916 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CBX1P83916 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CBX1P83916 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.83□□□□□ -1.48
CBX1P83916 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.83□□□□□ -1.48
CBX1P83916 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CBX1P83916 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.83□□□□□ -1.48
CBX1P83916 NACAP7-201ENST00000407371 609 ntBASIC5.83□□□□□ -1.48
CBX1P83916 RN7SKP199-201ENST00000410325 305 ntBASIC5.83□□□□□ -1.48
CBX1P83916 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.83□□□□□ -1.48
CBX1P83916 AL359633.1-201ENST00000421403 310 ntBASIC5.83□□□□□ -1.48
CBX1P83916 CLIC4P3-201ENST00000422221 752 ntBASIC5.83□□□□□ -1.48
CBX1P83916 AC000089.1-201ENST00000424559 801 ntBASIC5.83□□□□□ -1.48
CBX1P83916 GTF2IP14-201ENST00000441415 586 ntBASIC5.83□□□□□ -1.48
CBX1P83916 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.83□□□□□ -1.48
CBX1P83916 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.83□□□□□ -1.48
CBX1P83916 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.83□□□□□ -1.48
CBX1P83916 ST13P21-201ENST00000453250 1098 ntBASIC5.83□□□□□ -1.48
CBX1P83916 RNU7-157P-201ENST00000459600 66 ntBASIC5.83□□□□□ -1.48
CBX1P83916 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CBX1P83916 RPS16P9-201ENST00000477220 427 ntBASIC5.83□□□□□ -1.48
CBX1P83916 AC093890.1-201ENST00000502554 540 ntBASIC5.83□□□□□ -1.48
CBX1P83916 IGBP1P4-201ENST00000503202 879 ntBASIC5.83□□□□□ -1.48
CBX1P83916 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.83□□□□□ -1.48
CBX1P83916 AC138938.1-201ENST00000515431 782 ntBASIC5.83□□□□□ -1.48
CBX1P83916 SCARNA11.1-201ENST00000516918 132 ntBASIC5.83□□□□□ -1.48
CBX1P83916 CARSP2-201ENST00000520688 277 ntBASIC5.83□□□□□ -1.48
CBX1P83916 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.83□□□□□ -1.48
CBX1P83916 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.83□□□□□ -1.48
CBX1P83916 AC005632.2-201ENST00000564271 828 ntBASIC5.83□□□□□ -1.48
CBX1P83916 AL445670.1-201ENST00000618889 801 ntBASIC5.83□□□□□ -1.48
CBX1P83916 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.83□□□□□ -1.48
CBX1P83916 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CBX1P83916 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CBX1P83916 AC003973.3-201ENST00000624863 2822 ntBASIC5.83□□□□□ -1.48
CBX1P83916 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CBX1P83916 KARSP1-201ENST00000451871 1752 ntBASIC5.83□□□□□ -1.48
CBX1P83916 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.82□□□□□ -1.48
CBX1P83916 RBPJP5-201ENST00000449433 1447 ntBASIC5.82□□□□□ -1.48
CBX1P83916 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.82□□□□□ -1.48
CBX1P83916 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CBX1P83916 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.82□□□□□ -1.48
CBX1P83916 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CBX1P83916 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CBX1P83916 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CBX1P83916 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.82□□□□□ -1.48
CBX1P83916 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.82□□□□□ -1.48
CBX1P83916 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CBX1P83916 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CBX1P83916 RNU1-56P-201ENST00000391303 164 ntBASIC5.82□□□□□ -1.48
CBX1P83916 AC013442.1-201ENST00000397347 228 ntBASIC5.82□□□□□ -1.48
CBX1P83916 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.82□□□□□ -1.48
CBX1P83916 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CBX1P83916 FECHP1-201ENST00000431896 1214 ntBASIC5.82□□□□□ -1.48
CBX1P83916 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.82□□□□□ -1.48
CBX1P83916 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.82□□□□□ -1.48
CBX1P83916 AC234771.4-201ENST00000441416 730 ntBASIC5.82□□□□□ -1.48
CBX1P83916 RN7SL369P-201ENST00000477138 299 ntBASIC5.82□□□□□ -1.48
CBX1P83916 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.82□□□□□ -1.48
CBX1P83916 AL671862.1-201ENST00000515851 349 ntBASIC5.82□□□□□ -1.48
CBX1P83916 RNA5SP303-201ENST00000516192 130 ntBASIC5.82□□□□□ -1.48
CBX1P83916 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms