Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC027088.4-201ENST00000611559 1947 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PKNOX1P55347 MIR130B-202ENST00000385018 82 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PKNOX1P55347 RN7SKP86-201ENST00000410454 332 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC009963.3-201ENST00000458090 486 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 RPS23P2-201ENST00000463671 415 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AC090602.1-201ENST00000469695 252 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AC098847.1-201ENST00000473094 348 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.59□□□□□ -1.51
PKNOX1P55347 SETP21-201ENST00000514799 892 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 SCARNA18.1-201ENST00000516330 83 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 RN7SKP35-201ENST00000517210 151 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 BTG1P1-201ENST00000540396 508 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.59□□□□□ -1.51
PKNOX1P55347 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.59□□□□□ -1.51
PKNOX1P55347 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.59□□□□□ -1.51
PKNOX1P55347 MIR4776-2-201ENST00000580204 80 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 COX6CP7-201ENST00000597056 208 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.59□□□□□ -1.51
PKNOX1P55347 HTR1DP1-201ENST00000616500 888 ntBASIC5.59□□□□□ -1.51
PKNOX1P55347 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKNOX1P55347 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PKNOX1P55347 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PKNOX1P55347 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.58□□□□□ -1.52
PKNOX1P55347 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 RNA5SP279-201ENST00000365513 117 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PKNOX1P55347 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.58□□□□□ -1.52
PKNOX1P55347 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 RNF10P1-201ENST00000418589 369 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 PNKDP1-201ENST00000435914 430 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 RPSAP41-201ENST00000439695 860 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 ABCC13-202ENST00000463099 3842 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 RN7SL612P-201ENST00000497704 295 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 IGKV3D-25-201ENST00000519599 235 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 WBP1LP3-201ENST00000523033 208 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC137627.1-201ENST00000545761 289 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC007066.2-202ENST00000566531 914 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC027216.1-201ENST00000577726 685 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC124916.2-201ENST00000604416 224 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 AC005828.7-201ENST00000607331 556 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 AC111152.1-202ENST00000635848 339 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.58□□□□□ -1.52
PKNOX1P55347 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 CASC19-238ENST00000641523 1558 ntBASIC5.58□□□□□ -1.52
PKNOX1P55347 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.58□□□□□ -1.52
PKNOX1P55347 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.58□□□□□ -1.52
PKNOX1P55347 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKNOX1P55347 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.57□□□□□ -1.52
PKNOX1P55347 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PKNOX1P55347 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
PKNOX1P55347 AC015689.2-201ENST00000528172 1738 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms