Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPS23P6-201ENST00000466136 431 ntBASIC5.92□□□□□ -1.46
CDH4P55283 RPL32P33-201ENST00000487023 394 ntBASIC5.92□□□□□ -1.46
CDH4P55283 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH4P55283 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH4P55283 MTATP6P1-201ENST00000514057 681 ntBASIC5.92□□□□□ -1.46
CDH4P55283 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH4P55283 AC126615.2-201ENST00000553003 515 ntBASIC5.92□□□□□ -1.46
CDH4P55283 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH4P55283 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH4P55283 MIR4433B-201ENST00000581329 102 ntBASIC5.92□□□□□ -1.46
CDH4P55283 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH4P55283 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.92□□□□□ -1.46
CDH4P55283 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH4P55283 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH4P55283 MFSD8-239ENST00000641590 2479 ntBASIC5.92□□□□□ -1.46
CDH4P55283 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CDH4P55283 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH4P55283 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH4P55283 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 Z95114.1-201ENST00000624264 14574 ntBASIC5.91□□□□□ -1.46
CDH4P55283 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
CDH4P55283 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH4P55283 AL442128.2-201ENST00000620246 1824 ntBASIC5.91□□□□□ -1.46
CDH4P55283 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CDH4P55283 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH4P55283 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH4P55283 AL159987.1-201ENST00000347911 293 ntBASIC5.91□□□□□ -1.46
CDH4P55283 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 SDHDP6-201ENST00000414693 480 ntBASIC5.91□□□□□ -1.46
CDH4P55283 NIFKP3-201ENST00000417799 865 ntBASIC5.91□□□□□ -1.46
CDH4P55283 VN1R21P-201ENST00000426703 765 ntBASIC5.91□□□□□ -1.46
CDH4P55283 USP24P1-201ENST00000433802 779 ntBASIC5.91□□□□□ -1.46
CDH4P55283 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH4P55283 RPSAP37-201ENST00000470913 821 ntBASIC5.91□□□□□ -1.46
CDH4P55283 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 RPL7P51-201ENST00000490532 749 ntBASIC5.91□□□□□ -1.46
CDH4P55283 OR7E157P-201ENST00000494376 911 ntBASIC5.91□□□□□ -1.46
CDH4P55283 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH4P55283 HMGB1P42-201ENST00000532126 553 ntBASIC5.91□□□□□ -1.46
CDH4P55283 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH4P55283 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH4P55283 IGBP1P1-201ENST00000554337 1009 ntBASIC5.91□□□□□ -1.46
CDH4P55283 AC135626.1-201ENST00000556983 435 ntBASIC5.91□□□□□ -1.46
CDH4P55283 DPPA2P4-201ENST00000563717 878 ntBASIC5.91□□□□□ -1.46
CDH4P55283 AC009237.12-201ENST00000604755 742 ntBASIC5.91□□□□□ -1.46
CDH4P55283 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.91□□□□□ -1.46
CDH4P55283 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH4P55283 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH4P55283 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH4P55283 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH4P55283 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH4P55283 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.91□□□□□ -1.46
CDH4P55283 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
CDH4P55283 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
CDH4P55283 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 AC018628.1-201ENST00000624147 3819 ntBASIC5.9□□□□□ -1.46
CDH4P55283 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 TMSB4XP4-201ENST00000323496 618 ntBASIC5.9□□□□□ -1.46
CDH4P55283 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 SNORA17A-201ENST00000391185 133 ntBASIC5.9□□□□□ -1.46
CDH4P55283 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH4P55283 SUMO2P3-201ENST00000438311 288 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AC064862.4-201ENST00000442180 334 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AL161636.2-201ENST00000445179 927 ntBASIC5.9□□□□□ -1.46
CDH4P55283 HMGN1P36-201ENST00000446623 298 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AL358876.1-201ENST00000453364 1075 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AC012123.2-201ENST00000485809 248 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AC073610.1-201ENST00000489971 396 ntBASIC5.9□□□□□ -1.46
CDH4P55283 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CDH4P55283 RNU6-615P-201ENST00000516065 106 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH4P55283 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH4P55283 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH4P55283 AC010547.6-201ENST00000571789 193 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms