Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
CDKN2DP55273 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.58□□□□□ -1.52
CDKN2DP55273 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 SNORA64.1-201ENST00000362600 132 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AL158827.1-201ENST00000416300 391 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 RN7SL168P-201ENST00000463821 279 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 RPS23P6-201ENST00000466136 431 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AC006499.4-201ENST00000510947 694 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AC122688.1-201ENST00000541494 223 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AC092121.1-201ENST00000569452 202 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AC015802.2-201ENST00000589690 189 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKN2DP55273 AC025262.3-201ENST00000623666 360 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AC129778.1-202ENST00000623812 261 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AL591379.1-207ENST00000635982 261 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 AP001153.1-201ENST00000641024 338 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 OR4F13P-202ENST00000560066 2054 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 AL137141.1-201ENST00000624622 4836 ntBASIC5.58□□□□□ -1.52
CDKN2DP55273 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKN2DP55273 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKN2DP55273 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 MRE11P1-201ENST00000464884 2127 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKN2DP55273 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 NEPNP-201ENST00000404786 1371 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDKN2DP55273 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDKN2DP55273 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 OR7E101P-201ENST00000400428 513 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC127526.2-201ENST00000426436 775 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKN2DP55273 HMGB3P24-201ENST00000433260 622 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKN2DP55273 MTND2P40-201ENST00000436718 841 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 NANOGP9-201ENST00000439890 892 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 ACA64.1-201ENST00000459171 127 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKN2DP55273 NENFP3-201ENST00000503735 313 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKN2DP55273 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.57□□□□□ -1.52
CDKN2DP55273 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.57□□□□□ -1.52
CDKN2DP55273 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.57□□□□□ -1.52
CDKN2DP55273 AC099654.11-201ENST00000638857 294 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 AC119674.1-217ENST00000641942 1086 ntBASIC5.57□□□□□ -1.52
CDKN2DP55273 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDKN2DP55273 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDKN2DP55273 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDKN2DP55273 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDKN2DP55273 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKN2DP55273 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDKN2DP55273 AC092451.3-201ENST00000625067 1343 ntBASIC5.56□□□□□ -1.52
CDKN2DP55273 AC007938.2-201ENST00000604666 2634 ntBASIC5.56□□□□□ -1.52
CDKN2DP55273 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKN2DP55273 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKN2DP55273 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.56□□□□□ -1.52
CDKN2DP55273 OR7E25P-201ENST00000344844 931 ntBASIC5.56□□□□□ -1.52
CDKN2DP55273 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
CDKN2DP55273 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.56□□□□□ -1.52
CDKN2DP55273 AC245060.4-201ENST00000413293 1121 ntBASIC5.56□□□□□ -1.52
CDKN2DP55273 RNF10P1-201ENST00000418589 369 ntBASIC5.56□□□□□ -1.52
CDKN2DP55273 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.56□□□□□ -1.52
CDKN2DP55273 AC115283.1-201ENST00000427353 400 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms