Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC079171.1-201ENST00000568788 914 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 RN7SL426P-201ENST00000579106 295 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC125494.3-201ENST00000602759 455 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AC096553.1-201ENST00000605169 829 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AP000254.1-201ENST00000609934 520 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 MIR6780B-201ENST00000610307 79 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AC121761.2-201ENST00000617300 689 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC087821.2-201ENST00000637086 450 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AL392088.2-201ENST00000637607 285 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 MTND5P23-201ENST00000430812 1655 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 CR381670.1-201ENST00000624291 1693 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 AC023818.2-201ENST00000623817 2304 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC12P31275 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 AL136298.2-201ENST00000556497 1570 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC12P31275 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
HOXC12P31275 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXC12P31275 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXC12P31275 Z82198.3-201ENST00000421145 199 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC12P31275 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 AL139421.1-201ENST00000423010 169 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 ATP5F1P1-201ENST00000433775 569 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC064862.5-201ENST00000440618 334 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AL161626.1-201ENST00000441480 490 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 MTCYBP3-201ENST00000445588 1137 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 RN7SKP198-201ENST00000459286 306 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC084754.1-201ENST00000463466 464 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 RN7SL149P-201ENST00000465197 281 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC098583.1-201ENST00000480875 255 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC092045.1-201ENST00000495716 1231 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 RN7SKP98-201ENST00000517070 156 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC023632.1-201ENST00000518463 375 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC083923.1-201ENST00000523708 376 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
HOXC12P31275 AP001804.1-201ENST00000526868 919 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 YWHABP2-201ENST00000540201 713 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AL121766.1-201ENST00000547436 487 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC006530.1-201ENST00000555980 571 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 RN7SL366P-201ENST00000577957 292 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 RPSAP66-201ENST00000592196 606 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC12P31275 AC004987.4-201ENST00000603383 338 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms