Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 OR2AO1P-201ENST00000476497 403 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 RPL32P33-201ENST00000487023 394 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.06□□□□□ -1.44
HOXA9P31269 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA9P31269 AP001804.1-201ENST00000526868 919 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 OR4A6P-201ENST00000534364 970 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.06□□□□□ -1.44
HOXA9P31269 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 AP000550.3-201ENST00000637734 379 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 CASC19-264ENST00000641912 1184 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC079776.5-201ENST00000641920 211 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 AL034546.1-201ENST00000623740 3693 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC114786.1-201ENST00000512892 1415 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA9P31269 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXA9P31269 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 AC092724.1-201ENST00000624623 3397 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 AC130304.1-201ENST00000622942 2385 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXA9P31269 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXA9P31269 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXA9P31269 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC017078.1-201ENST00000416146 368 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 AC015977.1-201ENST00000418887 292 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 AL390119.1-201ENST00000440329 312 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC100832.1-201ENST00000471945 383 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC139365.2-201ENST00000517972 253 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC126615.2-201ENST00000553003 515 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HOXA9P31269 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 AL021707.7-201ENST00000607991 416 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 MIR6837-201ENST00000620884 64 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 MIR8080-201ENST00000622224 89 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 AC007159.1-201ENST00000566529 4706 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
HOXA9P31269 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 AC140479.2-201ENST00000421567 3130 ntBASIC6.05□□□□□ -1.44
HOXA9P31269 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXA9P31269 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA9P31269 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HOXA9P31269 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXA9P31269 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXA9P31269 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXA9P31269 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXA9P31269 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXA9P31269 MRE11P1-201ENST00000464884 2127 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXA9P31269 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXA9P31269 AL360271.1-201ENST00000395679 510 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXA9P31269 OR2W4P-201ENST00000406496 926 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 RMRPP5-201ENST00000411156 267 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXA9P31269 RPL6P21-201ENST00000418672 846 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXA9P31269 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXA9P31269 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXA9P31269 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXA9P31269 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXA9P31269 CYCSP51-201ENST00000443545 318 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXA9P31269 RPL35AP19-201ENST00000469425 329 ntBASIC6.04□□□□□ -1.44
HOXA9P31269 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms