Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.22□□□□□ -1.25
CNGA1P29973 CASC19-228ENST00000641414 1684 ntBASIC7.22□□□□□ -1.25
CNGA1P29973 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.22□□□□□ -1.25
CNGA1P29973 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CNGA1P29973 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
CNGA1P29973 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
CNGA1P29973 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 RNFT1P3-201ENST00000340898 1052 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 RNA5SP110-201ENST00000362638 115 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 RNA5SP284-201ENST00000384547 118 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 MTND4P11-201ENST00000417020 1058 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 Z68868.1-201ENST00000429048 544 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AK3P5-201ENST00000432033 519 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AC003989.1-201ENST00000434569 565 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 RPL32P14-201ENST00000463196 378 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 RN7SL177P-201ENST00000476596 299 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 LARP7P4-201ENST00000481075 878 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AC008410.1-201ENST00000483777 339 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 RPS4XP14-201ENST00000493072 781 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 SUMO1P1-201ENST00000497904 306 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 NAMPTP2-201ENST00000505629 1115 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 OR4D12P-201ENST00000509361 911 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 KHDC1P1-201ENST00000511053 508 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC7.21□□□□□ -1.26
CNGA1P29973 PRMT5P1-201ENST00000514351 598 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.21□□□□□ -1.26
CNGA1P29973 AP000662.1-201ENST00000530952 487 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 OR4A40P-201ENST00000533878 948 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.21□□□□□ -1.26
CNGA1P29973 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 MTCO2P22-201ENST00000603246 681 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 RPAP2P1-201ENST00000603626 1168 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AL157899.1-201ENST00000604110 936 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AC034229.4-201ENST00000607861 441 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AL352984.2-201ENST00000611153 546 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 AC004477.3-201ENST00000614061 590 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 MRPL57P1-201ENST00000621486 265 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 AP001002.2-201ENST00000625137 386 ntBASIC7.21□□□□□ -1.26
CNGA1P29973 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.21□□□□□ -1.26
CNGA1P29973 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
CNGA1P29973 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.21□□□□□ -1.26
CNGA1P29973 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CNGA1P29973 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 AC012078.1-201ENST00000405035 1646 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.2□□□□□ -1.26
CNGA1P29973 RNU6-1257P-201ENST00000384625 110 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 RNU4-27P-201ENST00000410889 139 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 NIFKP3-201ENST00000417799 865 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 MTND6P12-201ENST00000428247 522 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AC023141.3-201ENST00000436698 278 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AL645638.1-201ENST00000440519 361 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AL161636.2-201ENST00000445179 927 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 AC092691.2-201ENST00000461787 803 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 RPL23AP64-201ENST00000469465 435 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.2□□□□□ -1.26
CNGA1P29973 RPL7L1P4-201ENST00000513004 707 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AC027308.1-201ENST00000517993 110 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.2□□□□□ -1.26
CNGA1P29973 AP003396.4-201ENST00000527574 265 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.2□□□□□ -1.26
CNGA1P29973 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.2□□□□□ -1.26
CNGA1P29973 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.2□□□□□ -1.26
CNGA1P29973 AC068305.2-201ENST00000550567 1205 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.2□□□□□ -1.26
CNGA1P29973 AL512310.9-201ENST00000553311 948 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CNGA1P29973 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.2□□□□□ -1.26
CNGA1P29973 NPIPB1P-202ENST00000588786 828 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AL953862.2-201ENST00000603089 820 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AC025171.4-201ENST00000607250 1047 ntBASIC7.2□□□□□ -1.26
CNGA1P29973 AC112503.2-201ENST00000609005 552 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms