Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 IFIT1P1-201ENST00000400497 1449 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PTPN3P26045 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 RNA5SP477-201ENST00000362639 119 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RNA5SP500-201ENST00000364486 119 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 RNA5SP91-201ENST00000390902 119 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 VN1R12P-201ENST00000403778 876 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RN7SKP29-201ENST00000410957 272 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC117434.1-201ENST00000419971 836 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 AC069154.1-201ENST00000432914 542 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN3P26045 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 AL451063.1-201ENST00000450164 1133 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AL122020.1-201ENST00000472287 459 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 PDCL3P4-201ENST00000489621 720 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RPL37P23-201ENST00000492641 294 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RN7SL57P-201ENST00000493687 290 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC098799.1-201ENST00000504752 800 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC025458.1-201ENST00000506046 166 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC105384.2-201ENST00000508433 640 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 CCNHP1-201ENST00000513311 678 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RFPL4AP3-201ENST00000515267 345 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 Y_RNA.667-201ENST00000516212 107 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RNA5SP438-201ENST00000516561 112 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 RNU6-551P-201ENST00000516661 103 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 IGLV3-30-201ENST00000524362 298 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC027369.2-201ENST00000528030 440 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN3P26045 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 AC008126.1-201ENST00000549019 480 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 HNRNPCP1-201ENST00000556181 766 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC107958.1-201ENST00000556576 290 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 MIR4271-201ENST00000582451 67 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AP001357.1-201ENST00000586304 1053 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN3P26045 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN3P26045 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 AL138960.1-201ENST00000613838 513 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 AC024884.1-201ENST00000620583 399 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN3P26045 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTPN3P26045 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
PTPN3P26045 AC011933.2-201ENST00000578539 2790 ntBASIC5.93□□□□□ -1.46
PTPN3P26045 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN3P26045 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN3P26045 NCOA4P2-201ENST00000340589 1813 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN3P26045 CAP1P2-201ENST00000417455 1409 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN3P26045 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN3P26045 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN3P26045 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN3P26045 TMSB4XP2-201ENST00000335179 210 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 U3.10-201ENST00000364459 214 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 RN7SKP279-201ENST00000411383 298 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN3P26045 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN3P26045 VN1R31P-201ENST00000417498 730 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 GAPDHP48-201ENST00000436626 961 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 NDUFS5P5-201ENST00000437256 321 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN3P26045 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN3P26045 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN3P26045 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN3P26045 AC099521.1-201ENST00000482557 334 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 RN7SL170P-201ENST00000487098 295 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN3P26045 GAPDHP71-201ENST00000511530 1003 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN3P26045 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN3P26045 OR5H7P-201ENST00000514084 930 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 NPM1P52-201ENST00000518264 846 ntBASIC5.92□□□□□ -1.46
PTPN3P26045 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN3P26045 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN3P26045 AC011270.1-201ENST00000558606 583 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms