Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNA5SP375-201ENST00000362975 119 ntBASIC5.04□□□□□ -1.6
USF1P22415 RNU105B-201ENST00000364478 208 ntBASIC5.04□□□□□ -1.6
USF1P22415 RNU6-673P-201ENST00000365084 104 ntBASIC5.04□□□□□ -1.6
USF1P22415 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USF1P22415 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 OR7E101P-201ENST00000400428 513 ntBASIC5.04□□□□□ -1.6
USF1P22415 AL096711.1-201ENST00000404780 554 ntBASIC5.04□□□□□ -1.6
USF1P22415 SNRPEP6-201ENST00000407465 277 ntBASIC5.04□□□□□ -1.6
USF1P22415 RNU6-233P-201ENST00000410845 141 ntBASIC5.04□□□□□ -1.6
USF1P22415 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 GTF3AP1-201ENST00000416942 1004 ntBASIC5.04□□□□□ -1.6
USF1P22415 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 RPL34P3-201ENST00000421454 338 ntBASIC5.04□□□□□ -1.6
USF1P22415 AC016027.5-201ENST00000427227 210 ntBASIC5.04□□□□□ -1.6
USF1P22415 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 LYPLA1P1-201ENST00000434514 622 ntBASIC5.04□□□□□ -1.6
USF1P22415 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
USF1P22415 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 SNORA70.20-201ENST00000516848 126 ntBASIC5.04□□□□□ -1.6
USF1P22415 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 AC027308.1-201ENST00000517993 110 ntBASIC5.04□□□□□ -1.6
USF1P22415 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.04□□□□□ -1.6
USF1P22415 RNA5SP440-201ENST00000612665 119 ntBASIC5.04□□□□□ -1.6
USF1P22415 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.04□□□□□ -1.6
USF1P22415 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 AP005431.1-201ENST00000618479 319 ntBASIC5.04□□□□□ -1.6
USF1P22415 AL357562.1-201ENST00000624911 609 ntBASIC5.04□□□□□ -1.6
USF1P22415 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 AC024587.1-201ENST00000505925 2157 ntBASIC5.04□□□□□ -1.6
USF1P22415 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.03□□□□□ -1.6
USF1P22415 AL359091.1-201ENST00000449048 1734 ntBASIC5.03□□□□□ -1.6
USF1P22415 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 AC125336.1-201ENST00000508893 2827 ntBASIC5.03□□□□□ -1.6
USF1P22415 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 MSL3P1-202ENST00000440028 1468 ntBASIC5.03□□□□□ -1.6
USF1P22415 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 OR13C1P-202ENST00000641378 2919 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 CR788268.1-201ENST00000603931 1809 ntBASIC5.03□□□□□ -1.6
USF1P22415 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.03□□□□□ -1.6
USF1P22415 RN7SKP128-201ENST00000364270 303 ntBASIC5.03□□□□□ -1.6
USF1P22415 RNU1-59P-201ENST00000364829 162 ntBASIC5.03□□□□□ -1.6
USF1P22415 RN7SKP151-201ENST00000410230 316 ntBASIC5.03□□□□□ -1.6
USF1P22415 RPS15AP30-201ENST00000420976 390 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC021876.1-201ENST00000425959 359 ntBASIC5.03□□□□□ -1.6
USF1P22415 BRWD1P3-201ENST00000428816 390 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.03□□□□□ -1.6
USF1P22415 AL390879.1-201ENST00000439143 386 ntBASIC5.03□□□□□ -1.6
USF1P22415 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.03□□□□□ -1.6
USF1P22415 RPS27AP3-201ENST00000453803 454 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC110749.1-201ENST00000462007 357 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC023245.1-201ENST00000468501 517 ntBASIC5.03□□□□□ -1.6
USF1P22415 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.03□□□□□ -1.6
USF1P22415 RN7SL629P-201ENST00000489622 285 ntBASIC5.03□□□□□ -1.6
USF1P22415 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.03□□□□□ -1.6
USF1P22415 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.03□□□□□ -1.6
USF1P22415 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.03□□□□□ -1.6
USF1P22415 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.03□□□□□ -1.6
USF1P22415 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USF1P22415 AC110056.1-201ENST00000525759 911 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.03□□□□□ -1.6
USF1P22415 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.03□□□□□ -1.6
USF1P22415 AC027229.1-201ENST00000583887 253 ntBASIC5.03□□□□□ -1.6
USF1P22415 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 MIR4443-201ENST00000585052 53 ntBASIC5.03□□□□□ -1.6
USF1P22415 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.03□□□□□ -1.6
USF1P22415 AL512624.1-201ENST00000613638 469 ntBASIC5.03□□□□□ -1.6
USF1P22415 U1.25-201ENST00000614085 162 ntBASIC5.03□□□□□ -1.6
USF1P22415 U1.34-201ENST00000618578 162 ntBASIC5.03□□□□□ -1.6
USF1P22415 U1.31-201ENST00000620022 160 ntBASIC5.03□□□□□ -1.6
USF1P22415 AL137067.2-201ENST00000621202 131 ntBASIC5.03□□□□□ -1.6
USF1P22415 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.03□□□□□ -1.6
USF1P22415 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USF1P22415 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USF1P22415 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USF1P22415 MIR193BHG-214ENST00000641765 509 ntBASIC5.03□□□□□ -1.6
USF1P22415 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms